Trinickia caryophylli: U0034_01800
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Entry
U0034_01800 CDS
T09722
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcar03036
]
U0034_01800 (smc)
Chromosome and associated proteins [BR:
tcar03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
U0034_01800 (smc)
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Ortholog
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GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
SMC_hinge
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WQE12186
LinkDB
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Position
1:complement(407449..410967)
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AA seq
1172 aa
AA seq
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MRLTSIKLAGFKSFVDPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESRASELRGES
MQDVIFNGSTARKPGSRASVELVFDNADGRAAGQWGQYAEIAVKRVLTRDGTSSYYINNL
PARRRDIQDIFLGTGLGPRAYAIIGQGMIARIIEAKPEELRVFLEEAAGVSKYKERRRET
ENRLHDTRENLTRVEDIVRELGANLDKLEAQAEVATKFKSLQADGEEKQRLLWLLRKNEA
AAEQARQQKAISDAQVELEAQTARLREVEAGLETLRVAHYAASDAMQGAQGALYEANAEV
SRLEAEIKFIIESRNRVQSQIAALTAQREQWQMQAEKARGELEDAETQLAIAEEKAALAE
DDAAAKHDALPALEARWRDAQSGLNDERAGIAQTEQALKLEAAHQRNADQQLQQLQQRHE
RLRAEAGGLDAPDEAHLEEQRMQLAEHEEVQREAQACLAEAQETLPQLDEARRAAQERVQ
AESAQIHQLEARLVALKQLQENVQTEGKIQPWLDKHELGALPRLWKKLHVEAGWETALES
LLRERLAALEISNLDWVKAFASDAPPAKLAFYAPPQASAPREAPPGLRPLLSLVRIDDAG
LRAVLADWLDDVFVADDLAQALALRAQLTEGAALVVKAGHVVTRVGVQLYAADSEQSGML
ARQQEIENLTRQLRAQALLADEAKTAAIRAEAAYTQGSQALADARAQAERATQRVHALQL
EVLKLTQAHERYTQRSTQIREELDEIRAQIEEQQAQRAESEANFERHDGELAELQARFEE
NQLAFEALDEELGRARGEARDLERAATDARFAARNMANRIEELKRSIQVAHDQSERVAVS
LEDARAELETINEQTAHTGLQDALEVRAAKEAALGAARLELDDLTAKLRQSDEARLTAER
SLQPLRDRITELQLKEQAARIAGEQFDEQLSAAGVDEAQLQEKLTPDMRPSYLQGEVTRI
NNAISALGPVNMAALDELAAAKERKTFLDAQSADLTAAITTLEDAIRKIDQETRTLLQGT
FDEVNRHFGELFPRLFGGGQAKLIMTGDEILDAGVQVMAQPPGKKNSTIHLLSGGEKALT
ATALVFAMFQLNPAPFCLLDEVDAPLDDANTERFANLVRAMSDKTQFLFISHNKIAMEMA
QQLIGVTMQEQGVSRIVAVDMETAAGFAQNTA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgacctcgatcaaactcgctggcttcaagtccttcgtcgatcccacgcatttc
caggtccccggccaattggtcggggtcgtcgggccgaacggctgcggcaagtcgaacatc
atcgacgccgtgcgctgggtgctgggcgagtcgcgcgcctccgagctgcgcggcgagtcg
atgcaggacgtcatcttcaacggctcgaccgcccgcaagcccggcagccgcgcgagcgtc
gagctcgtcttcgacaacgccgacggccgcgcggccggacagtgggggcagtacgccgaa
atcgccgtcaagcgcgtgctgacgcgcgacggtacgtcgagctactacatcaacaacctg
ccggcgcgccggcgcgacatccaggacatcttcctcggcacggggctcggcccgcgcgcc
tatgccatcatcggccagggcatgatcgcgcgcatcatcgaggcgaagcccgaagagttg
cgcgtgttcctggaagaggccgccggcgtctcgaagtacaaggagcggcggcgcgagacg
gagaaccgtctgcacgacacgcgcgagaatctcacgcgcgtcgaggacatcgtgcgcgag
ctcggcgcgaatctcgacaagctcgaggcgcaggccgaggtcgcgacgaagttcaagtcg
ctgcaggccgacggcgaagagaagcaacgcctgctctggcttttgcgcaagaacgaagcg
gccgccgagcaggcgcgccagcaaaaggcgatctccgacgcgcaggtcgagctcgaggcg
cagacggcgcgtttgcgcgaggtcgaggccgggctcgagacgttgcgcgtcgcgcactat
gccgcgagcgatgcgatgcaaggggcgcaaggcgcgctttacgaagccaacgccgaggtg
agccggctcgaggccgagatcaagttcatcatcgaatcgcgcaaccgcgtgcagtcccag
atcgcggcgcttaccgcgcagcgcgagcagtggcagatgcaggcggagaaggcgcgcggc
gagctggaagacgccgagacgcagctcgccatcgccgaagagaaggcggcgctcgccgag
gacgacgcggcggcgaagcacgatgcgctgccggcgctcgaagcacgctggcgcgatgcg
cagtcggggctcaacgacgagcgcgcgggcatcgcgcagacggagcaggcgctcaagctc
gaggcggcgcatcagcgcaacgccgaccagcaactccaacagctgcagcagcgccacgag
cggctcagggccgaggcgggcgggctcgatgcgccggacgaggcgcatctcgaagagcag
cgcatgcagctcgccgagcatgaggaggtgcagcgcgaggcgcaggcgtgtctcgccgag
gcgcaggaaacgctgccgcagctggacgaagcccggcgcgcggcgcaagagcgggtccag
gccgaaagcgcgcagatccaccagctcgaggcgcgcctcgtcgcgctcaagcagttgcag
gagaacgtgcagaccgagggcaagatccagccctggctcgacaagcacgaactcggcgcg
ctgccgcggctctggaagaagctgcacgtcgaggccgggtgggagacggcgctcgaatcg
cttttgcgggaacggcttgccgcgctcgagatctcgaatctggattgggtgaaggccttc
gcgagcgacgcgccgccggccaagctcgcgttttacgcgccgccgcaggcatcggcgccg
cgcgaggcgccgcccggcctccggccgttgctctcgctagtgcgcatcgacgacgccggt
ttgcgcgcggtgctcgcggactggctcgacgatgtcttcgtggcggacgatctcgcgcag
gcgctcgcgctgcgggcgcaactgacggaaggggcagcgctcgtcgtgaaggcgggacac
gtcgtcacgcgcgtgggcgtgcagctctatgcagccgattccgagcaatcgggcatgctg
gcgcgccagcaggaaatcgaaaatctcacgcggcaactgcgcgcgcaggccctcttggca
gacgaggccaaaacggcggcgattcgcgcggaggccgcgtatacgcaaggctcccaggcg
ctggccgacgcccgtgcccaggcggagcgggccacgcagcgcgtgcacgcactgcagctc
gaggtgctcaagctcacgcaggcgcacgagcgctacacgcagcgcagcacgcagatccgc
gaggagctcgatgaaattcgagcccagatcgaggagcagcaggcgcagcgagccgagtcg
gaggccaacttcgagcgtcatgacggcgagcttgccgagctgcaggcccgtttcgaggaa
aatcagctcgccttcgaggcgctcgacgaggaattgggtcgtgcccgcggcgaggcgcgc
gatctcgagcgcgcggcaaccgacgcacgcttcgcggcgcgcaacatggcgaaccgcatc
gaggagctcaagcgcagcatccaggtggcgcacgatcagagcgagcgcgtggcggtctcg
ctcgaggacgctcgggcggaactcgagacgatcaacgagcagacggcgcacacgggcctg
caagacgcgctcgaagtgcgcgcggcgaaggaggctgccctcggcgctgcgcgcctcgag
ctcgacgatttgacggcgaagctgcgccagtcggatgaagcgcggctcacggccgagcgt
tcgctgcagccgctgcgcgaccgcattaccgagttgcagttgaaagagcaggcggcgcgc
atcgcgggggagcaattcgacgagcagttgagcgctgccggcgtggacgaggcgcaactg
caggaaaagctgacgcccgacatgcgaccctcgtatctgcaaggcgaggttacgcggatc
aacaatgcgatcagcgcgctcggccccgtcaatatggcggcgctcgacgaactcgcggcc
gccaaggagcgcaagaccttcctcgatgctcaatcggccgatctcacggcggcgatcacg
acgctcgaggatgcgatccgcaagatcgatcaggaaacgcgcacgctgctgcaaggcacg
ttcgacgaagtcaaccggcatttcggcgagctgttcccgcgccttttcggcggcgggcag
gcaaagctcatcatgacgggcgacgagattctcgacgccggcgtgcaggtcatggcgcag
ccgcccggcaagaagaattcgacgattcacctgctgtcgggcggcgagaaggcgttgacg
gccacggcgctcgtgttcgcgatgttccagctcaatccggcgccgttctgcctgctcgac
gaggtggacgcgccgctcgacgatgccaacacggaacgcttcgcaaatctcgtacgagca
atgtccgacaaaacgcaattccttttcatttcgcacaacaagatcgcgatggaaatggcg
cagcagttgatcggtgtgacgatgcaggagcagggcgtgtcgcgcattgtcgcggtcgac
atggaaacggctgcgggtttcgcccagaatacggcttga
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