Trinickia caryophylli: U0034_01820
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Entry
U0034_01820 CDS
T09722
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00300
Lysine biosynthesis
tcar01100
Metabolic pathways
tcar01120
Microbial metabolism in diverse environments
tcar01230
Biosynthesis of amino acids
Module
tcar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U0034_01820 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcar01002
]
U0034_01820 (dapE)
Enzymes [BR:
tcar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
U0034_01820 (dapE)
Peptidases and inhibitors [BR:
tcar01002
]
Metallo peptidases
Family M20
U0034_01820 (dapE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WQE12190
LinkDB
All DBs
Position
1:414001..415137
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AA seq
378 aa
AA seq
DB search
MSGTLALAEALIERASVTPDDQHCQRLLIERLEAIGFNCETIESHGVTNLWAVKRGTDAG
GKLLAFAGHTDVVPTGPLEQWSSPPFVPTHRDGKLYGRGAADMKTSIAGFVVAAQEFVAA
HPAHRGAIAFLITSDEEGPATHGTVKVVEALKARGITLDYCVVGEPTSDATLGDVVKNGR
RGSMSGKLVVKGLQGHIAYPHLAKNPVHLLAPALAELVAEHWDAGNEYFPPTTWQVSNFS
SGTGATNVIPGRAELMFNFRFSTASTVEGLQRRVHAILDKHGLDYELDWTVSGLPFLTPR
GELSEALERAIKDETGVTTQLSTTGGTSDGRFIARICKQVVEFGPPNGSIHKIDEHIELA
FVDPLKNIYRRVLEALIA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtactctcgccctcgccgaagcgctgatcgagcgcgcctcggtcacgcccgac
gaccagcactgccagcggttgctgatcgagcggctcgaggccatcggcttcaactgcgaa
accatcgaatcgcacggcgtgaccaatctctgggccgtcaagcgcggcaccgacgccggc
ggcaagctgctcgcgttcgcaggacacaccgatgtcgtgcctaccggcccgctcgagcaa
tggagctcgccgccgttcgtgccgacgcatcgcgacggcaagctctatggccgcggcgcc
gccgacatgaaaacgtcgatcgcgggcttcgtcgtggcggcgcaagagttcgtcgcggcc
catcccgcgcatcgcggcgccattgcgtttctgatcacgagcgacgaggagggtccggcc
acgcacggcaccgtcaaggtcgtcgaagcgctcaaggcgcgcgggatcacgctcgattac
tgcgtcgtcggcgaacccacgtcggatgcgacgctcggcgacgtcgtgaagaacggccgc
cgcgggtcgatgtcgggcaagctcgtcgtgaagggactgcaaggccacatcgcctacccg
caccttgcgaagaacccggtccatctgctcgcgccggcgctcgcggaactcgtcgccgag
cactgggacgccggcaacgagtacttcccgcccacgacctggcaggtctcgaatttctcg
agcggcacgggcgcgaccaacgtcattccgggccgcgcggaactcatgttcaacttccgc
ttttcgaccgcaagcaccgtggaagggctgcagcggcgcgtgcatgcgattctcgacaag
cacggcctcgactacgagctcgactggaccgtgagcggcctgccgtttctcacgccgcgt
ggcgagctctcggaggccctcgagcgcgcgatcaaggacgaaacgggtgtgacgacgcaa
ctctcgaccacggggggcacctccgatggccgcttcatcgcgcgcatctgcaagcaggtg
gtcgagttcggcccgcccaacggcagcattcacaagatcgatgagcatatcgaactcgcc
ttcgtcgatccgctcaagaatatttaccggcgcgtgctcgaagcactgatcgcctga
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