Trinickia caryophylli: U0034_01850
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Entry
U0034_01850 CDS
T09722
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tcar03012
]
U0034_01850
Translation factors [BR:
tcar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
U0034_01850
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_29
MMR_HSR1
RsgA_GTPase
MeaB
NACHT
ATP-synt_ab
AAA_23
SPAM
DUF3287
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WQE12196
LinkDB
All DBs
Position
1:420147..422096
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AA seq
649 aa
AA seq
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MIRFNQFSLARGVKPLFEGASFALNPGEKAGLVGANGAGKSTLFAVLRGELHPDAGDVAL
PPSWRIAHVAQETPAETKSALEYTLDGDAALREIETQMRTAEAAHDGEALGHAHAAFADA
DGYTAPARAEALLLGLGFTLAQTREPVSSFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL
DLDAIVWLEDWLHRYAGTLIVISHDREFLDSVCNVTLHLENRQIKRYGGNYSQFEILRAQ
QLALQQSAYEKQQKTVAHLQSFIDRFKAKATKARQAQSRMKALEKMELIAPAHVSSPFTF
EFRTPDAAPNPMLVMENVRCGYRGQDGAPDVPILKNVSLSIQNGQRIGLLGANGQGKSTL
VKTLAGTLAPLAGTMRQGRGLAIGYFAQHQLETLRPEDSPLAHLARIAPQTREQELRDFL
GSFNFSGDMASAPVAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALA
QFEGTLILVSHDRHLLRASTDQFMLVANHRLQPFDGDLDDYRDWLLEHAAEARAAARAAG
EAAGAALPGASEAAGNRKDQRRQEAQARQKLSQLKKPLQTRIARIEKEIEALNAEKASLD
ALVGDPASYEPAMKARLTEALRQQADIQSRLEALEAQWLEAQEELEQIG
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcttcaaccaattcagtctcgcgcgcggcgtcaagccgctcttcgagggcgcc
tcgttcgcgctcaaccctggcgaaaaggccggtctcgtcggcgccaacggcgccggcaaa
tcgacgcttttcgccgtgctgcggggcgaactgcacccggacgccggcgatgtcgcgctg
ccgccgtcgtggcgcatcgcacacgttgcacaggaaacacccgcggaaacgaagtccgca
ctcgaatacacgctcgacggcgatgccgcgctgcgcgagatcgagacgcagatgcgcacg
gccgaagcggcccacgacggcgaggcgctaggccacgcgcacgcagcattcgccgatgcc
gacggctacacggcgcccgcgcgtgccgaagcgctgctgcttgggctcggcttcactctc
gcccaaacgcgcgagccggtatcgagcttctcgggcggctggcgcatgcggctgaatctc
gcccaggcgctgatgtgccggtcggatctgcttctgctcgacgaaccgacgaaccacctc
gacctcgatgcgatcgtctggctcgaagactggctgcatcgctatgccggcacgctcatc
gtcatctcgcacgatcgggaattcctcgactcggtgtgcaacgtcacgctgcacctcgag
aatcgacagatcaagcgctacggcggcaactattcgcaattcgagatcctgcgggcacag
cagctcgccctgcagcaaagcgcctacgagaaacagcaaaagacggtcgcccacctgcaa
agcttcatcgaccgcttcaaggcgaaggccaccaaggcccgacaggcccaaagccggatg
aaggcgctcgaaaagatggagcttatcgcgccagcgcacgtcagttcccctttcacgttc
gaattccgcacgcccgatgcggcaccgaacccaatgctcgtcatggagaacgtgcgctgc
ggttatcgcggccaggacggcgcccccgacgttccgattctcaagaacgtttcgctctcg
atccagaacggtcagcgcatcggcctgctcggcgcgaacggccagggcaaatcgacactc
gtcaaaacgctcgcgggcacactggcgccgcttgccggcacgatgcgtcagggacgcggg
ctcgcgatcggctatttcgcccagcaccagctcgaaacgctgcgcccggaagattcgccg
ctcgcccatctcgctcgcatcgccccgcaaacgcgcgagcaggagctgcgcgatttcctc
ggcagcttcaatttctcgggcgatatggcaagcgcgcccgtggccccgttctcgggcggg
gaaaaagcacggctcgcgctggcgctgatcatctggcaaaagcccaacctgctgctgctc
gacgagccgacgaaccacctcgacctcgaaacgcgccatgcgctgacgatggcgctcgcg
cagttcgagggcacgctgatcctcgtgtcgcacgaccggcatttattgcgggcgagcacg
gatcagttcatgctcgtggcgaaccaccgcttgcagccgttcgacggcgatctcgacgac
taccgcgactggctgctcgagcatgcggccgaagcgcgggcagcagcccgcgccgcaggg
gaagccgctggagcggctctgcccggcgccagcgaggcggccggcaatcgcaaggatcaa
cggcgccaggaggcccaggcacggcaaaagctctcgcagttgaaaaagccgctgcaaacg
cgcatagcacgcatcgaaaaggagatcgaagcgctgaatgccgaaaaagcctcgctcgac
gcgctggtgggcgatcccgccagctacgagccggcgatgaaggcccggctcaccgaggcg
ttgcggcaacaggccgatattcagagccgcctcgaggcgctggaggcgcagtggctcgag
gctcaggaagagctcgagcagatcggatga
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