Trinickia caryophylli: U0034_02060
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Entry
U0034_02060 CDS
T09722
Symbol
rbbA
Name
(GenBank) ribosome-associated ATPase/putative transporter RbbA
KO
K13926
ribosome-dependent ATPase
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
U0034_02060 (rbbA)
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
ABC2_membrane
ABC2_membrane_2
HUTI_composite_bact
RsgA_GTPase
AAA_16
MMR_HSR1
ORC-CDC6-like
ABC2_membrane_4
Motif
Other DBs
NCBI-ProteinID:
WQE12231
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Position
1:463541..466333
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AA seq
930 aa
AA seq
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MARDTFDQAAALTGAQAGAPAVVRLSGVSLRYGKTVALDDVTLDVPAGCMVGLIGPDGVG
KSSLLSLIAGARALQQGHVEALGGDMAAARHRDAVCPHIAYMPQGLGKNLYPTLSVSENL
RFFARLFGHSPEEGRRRTEALTRATGLHPFLDRPAGKLSGGMKQKLGLCCALIHDPDLLI
LDEPTTGVDPLSRAQFWDLIARIRGARPDMSVVVATAYMDEAQRFDWIVAMDAGRVLATG
TPAQLLERTRCDNLEAAFIALLPEQKRAGHQPVRITPLAASGDAAIAIEAHDLTMKFGEF
VAVDHVSLRIRQGEIFGFLGSNGCGKTTTMKMLTGLLPATEGSATLFGRPVDSRDIHTRT
RVGYMSQAFSLYTELTVRQNLVLHARLFHVPEADVPARVQDMTARFGLQDVLDALPDSLP
LGMRQRLSLAVAMVHRPELLILDEPTSGVDPIARDTFWQLMIDLARHDRVTIFISTHFMN
EAERCDRISLMHAGRVLASGEPAELVRRRHAATLEEAFIGYLVEAENASAAPDGPDGGAV
LPVSPPHTAAQEPPHRAFSLARALTYTWRESLELRRDPVRAALALLGSLILLCVMGFGIS
LDVEDLRFAVLDRDQTVLSQDYALNLAGSRYFIEQPPLAGYADLDRRMRSGEVSLAVELP
PHFGRDVERGAPVEIGVWIDGAMPQRAETIRGYVVGMHQLWLLEQARHRLGVTPQARVDI
ETRYRYNPDVKSLPAIVPAVVPILLLMLPAMLTALAVVREIELGSIVNLYVTPVTRTEFL
LGKQLPYVALALVNFVSMALLSRFGFGVPIKGDLPTLALAVLIFSIISTGIGLFASTFTR
SQISAMFFTMIGTLVPAVQFCGMLNPVSSMEGSARAIGMLYPATYMLTISRGVFDKALGF
SQLQAEFWPMLAAVPVILGATIALLKKQEK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgacactttcgatcaagctgccgcgctgaccggggcacaggccggcgcgcct
gccgtcgttcgtctgagcggcgtaagtctgcgctacggcaagacggtggcgctcgacgac
gtcacgctcgacgtgccagccggatgcatggtcggacttatcggccccgacggcgtcggc
aagtcgagcctgctctcgctcatcgcgggcgcgcgggcgctgcagcaggggcacgtcgag
gcactcggcggcgacatggcggccgcgcggcatcgcgacgccgtgtgcccgcacatcgcc
tatatgccgcaggggctgggcaagaatctttatccgacgctttcggtgagcgagaacctg
cgcttcttcgcgcggctgttcggtcattcgcccgaggaaggtcgccggcgcacggaagca
ctcacgcgcgccaccggccttcatccgttcctcgaccgcccggccggcaagctctcgggc
ggcatgaagcaaaagctcggcctgtgctgcgcactcatccacgaccccgacctgctcata
ctcgacgagccgaccacgggtgtggatccgctttcgcgcgcacagttctgggacttgatc
gcccgcattcgcggtgcgcggcccgacatgagcgtcgtggtcgccacggcctacatggac
gaagcgcagcgcttcgactggatcgtcgcgatggacgcgggccgcgtgctcgcgacgggc
acgccggcgcagttgctcgagcgcacgcgttgcgacaatctcgaagcggccttcatcgcg
ctcttgcccgagcaaaagcgcgcggggcaccagcccgtgcggataacgccgctcgccgca
tcgggcgatgcggccatcgccatcgaagcgcacgacctgacgatgaagttcggcgaattc
gttgcggtcgatcacgtcagtctgcgcatccgccaaggcgagatcttcggctttctcggc
tcgaacggctgcggcaagacgacgacgatgaagatgctcaccggcctgctgccggccacg
gagggcagcgccacgctcttcgggcgccccgtcgattcgcgcgacattcacacgcgcacg
cgcgtcggctatatgtcgcaggcgttttcgctctataccgaactgacggtccgtcagaac
ctcgtcttgcacgcacgcctcttccacgtacccgaagccgacgtgcccgcacgggtgcag
gacatgacggcgcgcttcggcttgcaagacgtgctcgacgctctgcccgacagtctgccg
ctcggcatgcgccagcgcctgtcgctcgcggtggccatggtgcatcggcccgagctgttg
attctcgacgagcccacctccggcgtggatccgatcgcgcgcgatacgttctggcagttg
atgatcgatctcgcgcggcatgaccgcgtgacgatcttcatttccacgcatttcatgaac
gaagcggagcgctgcgaccgcatttcgctgatgcacgcggggcgcgtgctcgcgagcggc
gagccggccgagctcgttcgccgccgccacgccgcgacgctcgaagaagcgttcatcggc
tatctggtcgaagcggaaaacgcctccgcggcaccggacggcccggacggcggcgcggtg
ttgccggtctcgccgccgcacaccgccgcccaagagccgccgcatcgtgccttcagcctc
gcccgcgccctcacttacacttggcgcgaatcgctcgagctgcggcgcgatccggtgcgt
gcggcactcgcgctgctgggctcgctgattttgctgtgcgtaatggggttcggcatcagt
ctcgacgtcgaggacctgcgcttcgcggtgctcgaccgcgatcagaccgtgctaagccag
gattacgcgctcaacctggccgggtcgcgctacttcatcgagcagccgccgctcgcgggt
tacgcggatctcgaccgacgcatgcgcagcggggaagtatcgcttgccgtcgagctgccg
ccgcatttcggccgcgacgtcgaacgcggcgcgccggtcgagatcggcgtatggatcgac
ggcgcgatgccgcaacgcgcggaaacgattcgcggctatgtcgtgggcatgcaccagtta
tggctgctcgagcaggccaggcaccggctcggcgtcacgccgcaggcccgggtcgacatc
gaaacgcgctaccgctacaacccggatgtcaaaagcctgcccgcgatcgtgccggccgtc
gtgccgatcttgctgctgatgctgccggccatgttgacggcgctcgccgtggtgcgagaa
atcgagctgggctcgatcgtgaacctctatgtcacgcctgtcacgcgcaccgagttcctg
ctcggcaagcaattgccctatgtcgcgctcgccctcgtcaatttcgtctcgatggccctg
ctctcccgattcggcttcggcgtgccgatcaaaggcgacctgccgactcttgcgcttgcg
gtgctgatcttcagcatcatctcgacgggcatcggccttttcgcgtccacgttcacacgc
agccagatttcggcgatgttcttcacgatgatcggcacgctcgtgcccgcggtgcagttc
tgcggcatgctcaaccccgtttcgtcgatggaaggcagcgcgcgcgcaatcggcatgctg
tacccggccacctacatgctgaccatcagccgcggcgtgttcgacaaggcactgggcttc
tcgcagctgcaagccgaattctggccgatgctcgcagccgtgcccgtgattctgggcgcc
acgatcgcgctcctcaagaagcaggagaagtag
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