Trinickia caryophylli: U0034_02450
Help
Entry
U0034_02450 CDS
T09722
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
U0034_02450 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tcar01007
]
U0034_02450 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcar03016
]
U0034_02450 (cysS)
Enzymes [BR:
tcar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
U0034_02450 (cysS)
Amino acid related enzymes [BR:
tcar01007
]
Aminoacyl-tRNA synthetase
Class I (G)
U0034_02450 (cysS)
Transfer RNA biogenesis [BR:
tcar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
U0034_02450 (cysS)
Prokaryotic type
U0034_02450 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1
CysS_C
Motif
Other DBs
NCBI-ProteinID:
WQE12302
LinkDB
All DBs
Position
1:complement(546519..547913)
Genome browser
AA seq
464 aa
AA seq
DB search
MESLRIYNTLARDKQDFVPRQAGEVRMYVCGITVYDYCHIGHARMMVVFDVVQRWLRALG
FRVTYVRNITDVDDKIIRRAVENGETIKSLTDRFIAAMHEDADALGVARPDIEPRATQFI
PQMLGMIEKLETNGYAYRAKDGDVNYSVRKFEHYGALSGKSLEDLRAGERVAANEAKEDP
LDFVLWKRAKPAEPAESSWDSAFGRGRPGWHIECSAMSCALLGEHFDLHGGGQDLQFPHH
ENEIAQSEGATGQTFVNYWMHNGFVQIDNEKMSKSLGNFFTIREVLAKYDPEVVRFFILR
AHYRSPLNYSDVHLDDARAALTRLYTALKDAAPDDLALDWSEDHAARFRAAMNDDFNTPV
AVAVLFELASVVNRTRDGALARQLRALACTLGLLGREPRLFLQAAAGDAHGAFDEAAIEA
KIAERAAAKAAKNYAEADRIRAALLEAGVALEDKPGGLTEWRRV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaatcactgcgcatctacaacacgctcgcgcgtgacaagcaagacttcgtgccgcgc
caggcgggcgaggtgcggatgtacgtctgcggcattacggtctatgactactgccacatc
ggacacgcgcgcatgatggtggtgttcgatgtcgtgcagcgatggctgcgtgcgctcggc
tttcgcgtgacctacgtacgcaacatcaccgacgtcgacgacaagatcattcgccgcgcg
gtggaaaacggcgagacgatcaagtcgctgacggaccgtttcatcgccgcgatgcacgaa
gacgccgacgcactcggcgtcgcgcgtcccgacatcgaaccgcgtgctacccaattcatc
ccgcagatgctcggcatgatcgaaaagctcgagacgaacggctacgcctatcgggcgaag
gatggcgacgtcaactattcggtgcgcaagttcgagcactatggcgcgctgtcgggcaaa
tcgctcgaggatttgcgcgcgggcgagcgcgtcgccgcgaacgaggcgaaggaagatccg
ctcgatttcgtgctgtggaagcgtgcgaagcccgcggagccggccgagtcgagctgggac
tccgcgttcgggcgcggccgccctggctggcacatcgaatgttcggcgatgagctgtgcg
ttgctcggcgagcacttcgatctgcacggcggcgggcaggatctgcagtttccgcaccac
gagaacgagatcgcgcaaagcgaaggggcgacggggcagacgttcgtcaactactggatg
cataacgggttcgtgcagatcgacaacgagaagatgtcgaagtcgctcggcaacttcttc
acgatccgcgaagtgctcgcgaaatacgacccggaagtcgtgcgctttttcatcctgcgt
gcgcattaccgctcgccgctcaactacagcgacgtgcacctcgatgacgcacgcgccgcg
ctcacgcgcctttacaccgcgctgaaggatgccgcgcccgacgatctcgcgctcgactgg
agcgaggaccatgcggcacgttttcgcgcggcgatgaacgacgatttcaacacgccggtg
gcagtcgcggtgctgttcgaacttgcgagcgtcgtcaaccgcacgcgcgatggcgcactc
gcgcgtcaactgcgcgcgctggcgtgcacgctcggattgctcggccgcgagccgcgcctg
ttcctgcaggcggccgcgggcgacgcgcatggcgcgttcgacgaagcggccatcgaggcg
aagattgccgagcgcgccgccgcgaaggcggcgaaaaactatgccgaggcagaccggatt
cgcgcagcgttgctcgaagccggggttgcacttgaagacaaaccgggcgggcttaccgag
tggcgccgcgtatga
DBGET
integrated database retrieval system
