Trinickia caryophylli: U0034_02750
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Entry
U0034_02750 CDS
T09722
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
U0034_02750 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tcar01007
]
U0034_02750 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcar03016
]
U0034_02750 (lysS)
Enzymes [BR:
tcar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
U0034_02750 (lysS)
Amino acid related enzymes [BR:
tcar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
U0034_02750 (lysS)
Transfer RNA biogenesis [BR:
tcar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
U0034_02750 (lysS)
Prokaryotic type
Other AARSs
U0034_02750 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WQE12359
LinkDB
All DBs
Position
1:613526..615052
Genome browser
AA seq
508 aa
AA seq
DB search
MTEQTLPSLDSNADENKIIAERREKLHALRESGIAYPNDFRPTHHAGDLQCEYADADKDA
LEAKALDVAVAGRMMLKRVMGKASFATVQDVSGQIQFFVTPADVGAETYEAFKKWDLGDI
VAARGVLFRTNKGELSVRCTELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPEAR
KTFVGRTKAVSSIRKFMADAEFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPE
LYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMLEFYAAYTDYRWMMDFTERLIRQA
AIDALGTATITYQGRELDLAKPFHRLTITEAIRKYAPEYTDAQLADAAFVRTELKRFGVD
PTQPAFLNAGIGALQLALFEETAESQLWEPTFIIDYPVEVSPLARASDSVTGITERFELF
ITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMYYDADYIRALEYGMPPAGGCGV
GIDRLVMLLTDSPSIRDVILFPHLRRED
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagacccttccgagcctggactcgaacgccgacgagaacaagatcatcgcc
gagcggcgcgaaaagctgcacgcgctgcgcgagtccggcatcgcctatccgaacgatttt
cgtccgacccatcatgccggcgatctccagtgcgagtacgccgatgcggacaaggacgcg
ctcgaggcgaaggcgctcgacgtggccgtcgccggccgcatgatgctcaagcgcgtaatg
ggcaaggccagcttcgccacggtgcaggacgtctcgggccagatccagttcttcgtgacg
ccggccgacgtcggcgccgagacctacgaggctttcaagaagtgggacctcggcgatatc
gtcgccgcccgcggcgtgctctttcgtacgaacaagggcgagctgtcggtgcgttgcacg
gagctgcggctgctctcgaaagcactgcgccccctgcctgacaagttccacgggctggcg
gaccaggaaatgcgttaccggcaacgctatgtcgacctgatcgtcacgcccgaagcgcgc
aagacgttcgtcggccgcacgaaggcggtctcgtcgatccgcaagttcatggccgatgcc
gaattcatggaagtcgaaacgccgatgctgcacccgatcccgggcggcgcggcggcgaag
ccgttcatcacgcaccacaacgcgctcgacatgcagatgttcatgcgcatcgcccccgag
ttgtacctcaagcggctcgtcgtgggcggcttcgagcgcgtgttcgagatcaatcgcaat
ttccgcaacgaaggggtgtcgccacggcacaaccccgagttcacgatgctcgaattctat
gcggcgtacacggactaccgctggatgatggacttcaccgaacgcttgatccggcaggcc
gcgatcgatgcgctcggcacggcaacgatcacctatcagggccgcgaactcgatctggca
aagccgttccatcgcttgacgatcacggaggcgatccgcaagtacgcgcccgaatacacc
gatgcccaactcgccgacgcggcattcgtgcgcaccgagctcaagcggttcggcgtcgat
ccgacacaacccgcgttcctcaatgccggcatcggcgcgctgcagctcgcgctgttcgaa
gagacggccgaatcccagctttgggagccgaccttcatcatcgactacccggtcgaagtg
tcgccgctcgcgcgcgcctcggacagcgtgaccggcatcaccgaacgcttcgagctcttc
atcacgggccgcgagatcgcgaacggcttctcggagttgaacgatcccgaggatcaggcc
gcccgcttcaagaaacaggtcgagcaaaaggacgccggcgacgaagaggcgatgtattac
gacgccgattacatccgcgcgctcgaatacggcatgccgccggccggcggctgcggcgtc
ggcatcgatcgactcgtcatgctgctcaccgacagtcccagcattcgcgacgtcattctg
ttcccgcatttgcggcgcgaagactga
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