Trinickia caryophylli: U0034_03205
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Entry
U0034_03205 CDS
T09722
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
tcar02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_03205
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
U0034_03205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_03205
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
U0034_03205
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
WQE12448
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All DBs
Position
1:717535..718665
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AA seq
376 aa
AA seq
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MKSMLKILRPTAAGMLISVALSTQVSAAGPKTVSGPGTDPGCFKPESASTKYFQWPAKQG
PYRIALVNGFIANDWRVQMIRVAKAYVAQPAVKKDIKEFKVVSVGQDISAQIAAANNFID
QGFDAIIVDANSAAAFKGVVHKANAKGVVVVSFDNVIDSPDQISVNVNQIGLGEIAASFL
LKEAKKTGDLTFLHVRGPSGQPVDLARDKGFHGVLDKSGRKVKVVDVIGNWAPGDSQKAT
ADAISAGGVFDGIYVQGGSQGAVQAMLDAGKFKAPVSGETENAYRMLCDKAKLTCQSGGT
GPAQSAVAIKTALAALHGDVIPQSVALPTSIDYSPFTPGKDVFPSLPGSFFAGNNFPSCN
IGFSAEEIATQTGTNN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcatgctgaagattctgcgtcccacggcagcgggaatgttgatatcggtcgcg
ttgtcgacgcaggtctcggcagccggtcccaagaccgtgagcgggccgggcaccgatccg
ggctgcttcaaacccgaatccgccagcacgaaatacttccagtggcccgccaaacagggc
ccctaccgcatcgcgctcgtcaacggattcatcgccaacgactggcgcgtccagatgatc
cgcgtcgccaaagcgtacgtggcgcagcccgcggtgaaaaaagacatcaaggaattcaag
gtcgtctccgtcggccaggacatctccgcacagatcgcggccgccaataacttcatcgac
cagggcttcgacgcgatcatcgtcgacgccaacagcgccgcggcgttcaagggcgtcgtg
cacaaggccaacgccaagggcgtggtcgtcgtgtccttcgacaatgtgatcgacagcccc
gatcagatttcggtcaacgtcaaccagatcggcctcggcgagatagccgcctccttcttg
ctgaaggaggccaaaaagacgggcgatctgactttcctgcacgtgcgtggcccgtccggc
cagcccgtcgatctcgcgcgcgacaaaggatttcacggcgtgctcgacaagtccggccgc
aaggtaaaggtggtcgacgtgatcgggaactgggcgccgggcgactcgcaaaaggccacc
gccgacgcgatttccgccggaggcgtcttcgacggcatttatgtccagggcggatcgcaa
ggcgcggtgcaggccatgctcgatgccggcaaattcaaggcaccggtttcgggcgaaacc
gagaacgcttatcgcatgctttgcgacaaggccaaactcacctgccagtcgggcggcaca
ggccccgcacagagcgccgtggcaatcaagaccgcgcttgccgcactgcacggcgacgtg
attccgcaaagcgttgcgctgcccacctcgatcgactattcgccgttcacgccgggcaag
gacgtcttccccagcctgccgggaagcttctttgcaggcaataacttcccgagctgcaac
atcggcttctcggccgaggaaatcgccacgcaaaccggcacgaacaactga
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