KEGG   Trinickia caryophylli: U0034_03520
Entry
U0034_03520       CDS       T09722                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_03520 (tssF)
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_03520 (tssF)
SSDB
Motif
Pfam: T6SS_TssF Cu-oxidase_4
Other DBs
NCBI-ProteinID: WQE12507
LinkDB
Position
1:784686..786509
AA seq 607 aa
MEELLAHYERELALLRRSMQSFAARYPKIAARLAISGEHSEDPHVERMLQSFALLAARID
TKLEDDYPELTEALVDILYPQYLRAFPASAIAQFKTDAFHDKLTAPATVERGTALMAKAA
DCRFRTVYDVVLAPVHLAHAGYRPTPSAPPGITLPAETTAAISIGFASIGQASRLDKVAP
GVMRVHLSGPREVVAALSDVVRLKAAAAYVEADGSGRWTPLAKIPVSSVGFGENESMAGR
LGDAPPAFRSLMEYFAFPEKFDFLDIDMAALLAAAGPCQSVTLHLAIAELHPDSRAAQRI
AKLDAGTFKLFATPVVNLFERDTTPIKIAPDTKHYSLFANVDDMSVCEVFSIDAVYTNDP
APARNVTIAPMHSLRHGSTAALDGPYWTAVVDRWSADPQRRTRPELVFVGLDGAPIVPPF
GQVAVDMTCTNGELPASLPIGLPGGDLESETSELARDVALLTRPTQPLRLPRGNGALWRL
IAQMTPHSLDLDAAGLEALKELLREFAALSPSRSPQIEGIVSLAARATMQWLTMEPSPAF
ARGLEIRVTVDEHAFAASSLYTFAGIMDRFFAPYAPANSFVQIVLVSKNYGNEIVRCAPR
PGDRPLI
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggaagaactgcttgctcattacgagcgcgagctcgcgctgcttcgccgctcgatgcaa
tcgttcgcggcccgctatccgaaaatcgctgcccggctcgcaatctcgggcgagcattcg
gaggacccccacgtcgagcgcatgctccagtcgttcgcgctgctggccgcgcgaatcgac
acgaagctcgaggacgactacccggagctcaccgaggcgctcgtcgacattctctacccc
caatatctgcgcgcgtttccggcaagcgcgatcgctcagttcaagacggacgcgtttcac
gacaagctgaccgcaccggccacggtcgagcgcggcacggccctcatggcgaaagcggcc
gactgccgcttccgcaccgtctacgacgtcgtgctcgcgccggtccatctcgcgcatgcc
ggctatcggccaacgccgtcggcaccgcccggcatcacgctgccggccgagacgaccgcc
gcgatctcgatcggctttgcgtcgatcggtcaggccagccggctcgacaaagtggcgcca
ggcgtcatgcgcgtgcatttgagcgggccgcgagaggtcgtcgccgcgctttcggatgtc
gtgcggctcaaggccgcggcagcctacgtggaagcggacggctcgggccgttggacgccg
cttgcaaagataccggtctcgtccgttggcttcggcgaaaacgaatcgatggccggccgc
ctgggcgatgccccgccggccttccgctcgttgatggaatacttcgcgtttcccgagaaa
ttcgatttcctcgatatcgacatggccgcgctgctcgccgcggcgggtccctgccagagc
gtaacgctccatctggccatcgccgagctgcatcccgattcgcgcgcggcccagcgcatc
gcgaagctcgatgccggcaccttcaagctcttcgccacgcccgtcgtcaatctgttcgag
cgcgacaccacgccgatcaagatcgcgccggatacgaagcattattcgctgttcgcgaac
gtcgacgacatgtcggtctgcgaagtcttctcgatcgacgcggtgtacacgaacgacccg
gcccccgcgcgcaacgtgacgattgcgccgatgcattcgctgcgccacggaagcaccgcg
gcgctcgacggcccgtactggacagccgttgtcgaccgctggagcgcggacccgcaacgc
cgtacgcgcccggaactcgtcttcgtcgggctcgacggcgcgcccatcgtgccgcccttc
ggccaggtcgcagtcgacatgacctgcacgaacggcgagttgcccgcctcgttgccgatc
ggtctgcccggcggcgacctcgaaagcgagacgagcgagctggcacgcgatgtggcgctg
ctcacgcgccccacgcagccgttgcgtctgcctcgcggcaacggtgcgctatggcgcctg
atcgcgcagatgaccccgcactcgctcgatctcgatgcggccggactggaagcgctcaag
gaattgctgcgcgaattcgctgcgctttcgccgtcccgctcgccgcagatcgagggcatc
gtctcgctcgccgcgcgcgcaacgatgcagtggctcacgatggagccgtcgcccgcgttc
gcgcgcggactcgagattcgcgtgaccgtcgacgagcacgcgttcgccgcgagcagcctc
tacacgttcgcgggcatcatggatcgtttcttcgcgccctatgcaccggccaacagcttc
gtgcagatcgtgctcgtttcgaagaactacggaaacgagatcgtgcgctgcgcgccgcgc
ccgggcgacaggccactcatctga

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