Trinickia caryophylli: U0034_03995
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Entry
U0034_03995 CDS
T09722
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tcar01011
]
U0034_03995
Enzymes [BR:
tcar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
U0034_03995
Peptidoglycan biosynthesis and degradation proteins [BR:
tcar01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
U0034_03995
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
New_glue
Motif
Other DBs
NCBI-ProteinID:
WQE12589
LinkDB
All DBs
Position
1:complement(891122..892807)
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AA seq
561 aa
AA seq
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MRFFLSTLLVLMLAACASQGPGANSASSSSSEASNAQAATDTLRAVTAKQTIDVDKSSVD
QLTSADSDLWGRIRRGFQMPDLQSDLVDMQVNWYAQRPDYVERMTERSQKYLYYIVEELE
SRHMPTELALLPFIESAYNPQALSVAKAAGMWQFVPDTGRTYNLKQNMWQDERRDVLAST
GAALDYLSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYQSLRMPNETRNYV
PKLQAVKNIVANPQIYGLALPSIPNHPYFVTVTTSHDIDVAMAAKLANMSADEFRALNPS
FKKPVILGATEPQILLPFDNASAFERNLKRYDGQLSSWTTYTVTERARPAALAEKIGVDA
ATLMAVNKIPAGMRLKPGSTLLVPRDDDDDEDISADVAESAVLAMEPDVPDTRKMLIRVR
RKQSMAAVAARYQVSVGQLKSWNKTRRDTLLPGQVIVLHVPVGRALPAEPGPQKLATAMP
ADVKPEKVSARATDVPSASRAGKASVRKQGATKAVKTAARTNAKAAPAPKATASKSSKKA
TKEASGKSTTVASRKSAREQQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttttcctcagtacgctactggttctcatgctcgccgcgtgcgcgagtcagggg
cccggggcgaactctgcctcctcctcctcctcagaggcttccaacgcgcaagccgccacc
gatacgctgcgcgccgtcactgcaaaacagacgatcgacgtcgacaaaagctcggtcgat
caactgacgagtgccgattccgatctgtgggggcgcattcgccgcggcttccagatgccc
gatctgcaaagcgacctcgtcgacatgcaggtgaactggtatgcccagcgtcccgactac
gtcgagcgcatgacggagcggtcgcaaaagtatctctattacatcgtcgaagagctcgag
tcgcgccatatgccgaccgaactcgcgctgctgccgttcatcgaatcggcgtacaacccg
caggccctgtcggtcgcgaaggcggccggcatgtggcagttcgtgccggacacgggccgc
acgtacaacctcaagcagaacatgtggcaggacgagcgccgcgacgtgctggcatcgacg
ggtgccgcgctcgattacctctcgcggctgcacgacatgttcggcgactggtacctcgcg
cttgccgcctacaactggggcgaaggcaacgtgcagcgcgccatcgcgcgcaatcaggcg
gcggggctgcccaccgactatcagagcctgcgcatgcccaacgagacgcgcaactacgtg
ccgaagctgcaggccgtgaagaacatcgtcgcgaatccgcagatttacgggttggcgctg
ccgtcgattccgaaccatccgtacttcgtgaccgtcacgacgtcgcacgacatcgacgtg
gcaatggccgcgaagcttgcgaacatgtcggctgacgaattccgtgcgctcaatccgtca
ttcaagaaacccgtgatcctcggtgccaccgagccgcagattctgctgccgttcgacaac
gcgagtgcgttcgagcgcaacctcaagcgctacgacggtcagctctcgtcgtggaccacc
tacacggtgaccgagcgcgcgcggccggcggcgcttgcagagaagatcggtgtcgatgcc
gcgacgctgatggccgtcaacaagattcccgccggcatgcgtctgaagccgggctcgacg
ctgctcgtgccgcgcgacgacgacgatgacgaggacatcagcgccgatgtggcggaaagc
gcggtgctcgcaatggagcccgacgtgccggacacgcgcaagatgctgattcgcgtgcgc
cgcaagcagtcgatggcagccgtggcggcgcgctatcaggtgtcggtcggtcagttgaag
tcgtggaacaagacccggcgcgacaccttgctgcccggtcaggtgatcgtgctgcatgtg
ccggtgggtagagcgctgcccgctgaaccgggcccgcagaaactggccacggcgatgccc
gcggacgtcaagccggagaaggtatccgcgcgcgctaccgacgtcccttcagcttcccgt
gccggcaaggcgtcggtacgcaagcagggcgcgaccaaggcggtgaagacggctgcacgt
acgaacgccaaggctgcgccggcgccgaaggccacggcctcgaagtcgtctaaaaaggcg
acgaaggaagcgagcggcaaatcgacgaccgttgcctcgcgcaagagtgctcgagagcag
cagtag
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