Trinickia caryophylli: U0034_04015
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Entry
U0034_04015 CDS
T09722
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar03030
DNA replication
tcar03430
Mismatch repair
tcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0034_04015 (dnaQ)
03430 Mismatch repair
U0034_04015 (dnaQ)
03440 Homologous recombination
U0034_04015 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcar03032
]
U0034_04015 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tcar03400
]
U0034_04015 (dnaQ)
Enzymes [BR:
tcar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U0034_04015 (dnaQ)
DNA replication proteins [BR:
tcar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U0034_04015 (dnaQ)
DNA repair and recombination proteins [BR:
tcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U0034_04015 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WQE12592
LinkDB
All DBs
Position
1:895133..895888
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AA seq
251 aa
AA seq
DB search
MRQIVLDTETTGLNARTGDRIIEIGGVEIVNRRLTGRNLHFYVNPERDSDPGALAVHGLT
TEFLSDKPKFAEVADAVRDFVHDAELIIHNAPFDLGFLEAEFALLGLPPFREHYASVIDT
LVQAKSMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQETLVIDML
SETAVQADAGSPRVSIALESMALPVIAADEAELGAHQAVLDDIEKRSKSTSVWRREPEPA
TGSSSDVAQAA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagatcgtcctcgataccgaaaccacaggcctcaacgcacgcacaggggaccgc
atcatcgaaatcggcggcgtggaaatcgtcaaccgccgcctgaccggcaggaatctacat
ttttacgtcaaccccgagcgcgacagcgacccgggcgcgctggcggtgcacggcctcacg
accgagtttctcagcgacaagccgaaattcgccgaagtcgccgacgcggtgcgcgacttc
gtgcacgacgcggaactcatcatccacaacgcgccgttcgatctgggctttctcgaagcc
gagttcgcgctgctcggcctgcccccgttccgagagcattacgcgagcgtgatcgataca
ctcgtgcaggccaagtcgatgttccccggcaaacgcaactcgctcgacgcgctgtgcgac
cgcttcggaatcagcaatgcgcaccgcacgctgcacggcgccttgctcgactccgagttg
ctggccgaggtgtatctggccatgacgcgtggacaggaaacgctcgtcatcgacatgctg
agcgaaacggcggtacaggcggatgcgggctcccctcgtgtgtccatcgcgctcgaatcg
atggccctgcccgtgatcgcggccgacgaggcggaactcggggcgcatcaggccgtgctc
gacgatatcgagaaacgcagcaagagcacgagcgtgtggcggcgcgagccggagcccgca
accgggtccagttcggacgttgcgcaagccgcttaa
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