Trinickia caryophylli: U0034_04290
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Entry
U0034_04290 CDS
T09722
Name
(GenBank) porin
KO
K03285
general bacterial porin, GBP family
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
U0034_04290
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GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
WQE12637
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Position
1:952604..953737
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AA seq
377 aa
AA seq
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MRKTLLVGALAGVFASMAHAQSSVTLYGLIDAGITYTNNYQGHSNWQQTSGMINGSRWGL
RGAEDLGGGLKAIFTLENGFNINTGTLGQQSREFGRQAYVGLSSEQFGTVTLGRQYDDVV
QYLGPLALTGTQYGGTTFAHPYDNDNLDNSFRVNNSVHYQTPSYGGFKLGAMYGFSNSAG
AFSNNRAYSIGASYNWAGFNFAAAYLQVNNGLSSNTTTALGTNTGGAVTDSYFTAGRQRI
WGAGLNYTFGPATAGFVFTQSRVDNLTTIANVGTLPGSNSMRFNNYEVNARYALTPSLSL
AGEYTFTDGRLNNADPKWHTVGLQADYMLSKRTDVYLEGEYQHVSQDGTGLTAYINGLRP
STTPNQVAVTAGIRHRF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagactctattggtcggcgccctcgcgggcgtatttgcatcgatggctcatgcg
caaagcagcgtcacgctgtacggcttgatcgacgcgggcatcacgtacacgaacaattat
cagggccacagcaactggcaacagacgagcggcatgatcaacggcagccgctggggcttg
cgcggtgccgaagatctcggcggcggcctcaaggcaatcttcacgttggaaaacggcttc
aacatcaacaccggtacgctcggccaacagagccgcgagttcggccgtcaggcctacgtc
ggcctgtcgagcgaacagttcggtaccgtcacactgggccgccagtacgacgacgtggtg
caatacctcgggccgctggcgctcaccggcacgcaatacggcggcacgacgttcgcccac
ccgtacgacaacgacaacctcgacaactcgttccgggtaaacaattccgttcattatcaa
acgcctagctacggcggcttcaagctgggcgcgatgtacggtttctccaactcggcgggc
gcgttctcgaacaaccgcgcgtacagcatcggcgcgtcgtacaactgggccggcttcaac
ttcgcggccgcttatctgcaagtgaacaatggcttgtcgtcgaacacgacgacggctctc
ggaacaaacacgggcggcgcggtaaccgactcctacttcaccgcgggccgccagcgcatt
tggggcgcaggcctgaactacacgttcggcccggcgaccgcaggtttcgtatttacgcag
tcgcgcgtcgacaacctcacgaccatcgccaacgtggggacgctcccgggctcgaactcg
atgcgcttcaacaactatgaagtcaacgcgcggtacgcactcacgccgtcgttgagcctc
gcgggcgagtacaccttcacggacggcaggctgaacaacgccgatccgaagtggcacacc
gtcgggctgcaagccgactacatgctctcgaagcggaccgacgtctatctggaaggcgag
taccaacacgtgagccaggatggcacgggcctcacggcgtatatcaacggtctgcgcccg
tcgactacgccgaatcaggtcgccgtgaccgccggcatccgtcaccggttctaa
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