Trinickia caryophylli: U0034_05110
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Entry
U0034_05110 CDS
T09722
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0034_05110 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcar03019
]
U0034_05110 (groL)
03110 Chaperones and folding catalysts [BR:
tcar03110
]
U0034_05110 (groL)
03029 Mitochondrial biogenesis [BR:
tcar03029
]
U0034_05110 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcar04147
]
U0034_05110 (groL)
Enzymes [BR:
tcar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
U0034_05110 (groL)
Messenger RNA biogenesis [BR:
tcar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
U0034_05110 (groL)
Chaperones and folding catalysts [BR:
tcar03110
]
Heat shock proteins
HSP60 / Chaperonin
U0034_05110 (groL)
Mitochondrial biogenesis [BR:
tcar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
U0034_05110 (groL)
Exosome [BR:
tcar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
U0034_05110 (groL)
Exosomal proteins of other body fluids (saliva and urine)
U0034_05110 (groL)
Exosomal proteins of breast cancer cells
U0034_05110 (groL)
Exosomal proteins of colorectal cancer cells
U0034_05110 (groL)
Exosomal proteins of bladder cancer cells
U0034_05110 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5881
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
WQE12786
LinkDB
All DBs
Position
1:complement(1114999..1116639)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELEDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVQAAVEELRKVSKPCTTSKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDG
KSLADELEVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV
IAEETGLTLEKATLQELGQAKRIEVAKENTTIIDGAGDAKNIEARVKQIRTQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI
RARAAIASVKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNA
ATGEYGDLVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKKEAAAPGGMPGGMG
GMGMDM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtcgtattcggcgacagcgcacgtgccaagatggttgaaggcgtg
aatatcctcgccaacgcggtgaaggtcacgctgggtccgaagggccgcaacgtcgtgctc
gagcgtagcttcggcggcccgacggtcaccaaggacggtgtgtcggtcgcgaaggaaatc
gagctcgaggacaagctccagaacatgggcgcgcaaatggtcaaggaagtcgcttccaag
accagcgacaacgccggcgacggcacgacgacggcaacggtgctggcccagtcgatcgtt
cgtgaaggcatgaagtacgtcgcatcgggcatgaacccgatggacctcaagcgcggcatc
gacaaggccgtgcaagctgctgtggaagagctgcgcaaggtcagcaagccctgcacgacg
agcaaggaaatcgctcaggtcggcgcgatctcggcaaacagcgactcgtcgatcggcgat
cgcatcgccgaagcgatggacaaggtcggcaaggaaggcgtgatcacggtcgaagacggc
aagtcgcttgccgacgaactcgaagtcgtggaaggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaaccccgacaagcaagtcgccgtgctcgagaacccgttcgtg
ctgctgcacgacaagaaggtgtcgaacattcgcgatctgctgccggtgctcgagcaagtg
gccaaggctggccgcccgctgctgatcatcgctgaagacgtggaaggcgaagcgctcgcc
acgctcgtcgtcaacaacatccgcggtatcctgaagaccgttgcggtcaaggcgccgggc
ttcggcgatcgtcgcaaggcgatgctcgaagacatcgcgatcctgaccggcggccaggtc
atcgccgaggaaacgggcctgacgctcgagaaggcgacgctgcaagagctcggccaagcc
aagcgcatcgaagtggccaaggaaaacaccacgatcatcgacggtgccggcgacgcaaag
aacatcgaagcgcgtgtgaagcagatccgcacgcaaatcgaagaagcgacctcggactac
gatcgcgagaagctgcaggagcgcgtggcgaaactggccggcggcgtggccgtcatcaag
gtcggtgctgcaaccgaagtcgaaatgaaggaaaagaaggcgcgtgtcgaagatgcgctg
cacgctacgcgcgcagccgttgaagaaggcatcgtgccgggcggcggcgttgcgctgatc
cgtgctcgcgccgcgatcgccagcgtgaagggcgccaacgccgatcaagacgccggcatc
aagatcgtgctgcgcgcgatggaagagccgctgcgtcagatcgtgacgaacggcggcgag
gaagccagcgttgtcgtggcggctgtcgctgccggcaagggcaactacggctacaacgcg
gccaccggtgaatacggcgacctcgtggaagccggtgtcgtcgacccgacgaaggtgacg
cgcacggcgctgcaaaacgccgcgtccgtcgcaggcctgctgctcacgaccgatgcggcc
gttgccgagctgccgaagaaggaagcggctgctcctggcggcatgccgggcggcatgggc
ggcatgggcatggacatgtaa
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