KEGG   Trinickia caryophylli: U0034_05890
Entry
U0034_05890       CDS       T09722                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
tcar  Trinickia caryophylli
Pathway
tcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0034_05890
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_05890
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_05890
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: WQE12928
LinkDB
Position
1:complement(1295128..1295631)
AA seq 167 aa
MKDMYMQFGNPAIKGESADKDHLNWIELASWNHSITQPRSATASTAGGHTSERCEHSDMT
FTKDIDVVSPLLYQHASGGTTFDEVTIDFMRSDGEGKRVKYLEIKLKYVIISSISPSVVN
EGLPTETFSLKYAAVQWKYTQQKIGGNQGGNAQGAWSLTKNDKTYAV
NT seq 504 nt   +upstreamnt  +downstreamnt
atgaaggacatgtacatgcagttcggcaaccccgccatcaaaggcgaatcggccgacaag
gatcatctgaactggatcgagctcgcctcgtggaatcattcgatcacgcagccgcgctcg
gccacggcgtcgaccgcgggcggccacacgtcggagcgctgcgagcactccgacatgacg
ttcacgaaggacatcgacgtcgtgagcccgctgctttatcagcacgcctcgggtggcacc
acgttcgacgaagtcacgatcgacttcatgcgctcggacggcgagggcaagcgcgtcaag
tacctcgagatcaagctcaagtacgtgatcatttcgagcatttcgccgagcgtggtcaat
gaaggcctgccgacggaaacgttttcgctcaagtacgcggccgttcaatggaagtacacg
cagcaaaagatcggcggtaaccagggcggcaacgcacagggtgcctggagcctgacgaag
aacgacaagacctacgcggtctga

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