KEGG   Trinickia caryophylli: U0034_06035
Entry
U0034_06035       CDS       T09722                                 
Symbol
recN
Name
(GenBank) DNA repair protein RecN
  KO
K03631  DNA repair protein RecN (Recombination protein N)
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcar03400]
    U0034_06035 (recN)
DNA repair and recombination proteins [BR:tcar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     U0034_06035 (recN)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    U0034_06035 (recN)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_21 AAA_29 AAA_22 RsgA_GTPase nSTAND3 AAA_15 MscS_porin
Other DBs
NCBI-ProteinID: WQE12955
LinkDB
Position
1:1326342..1328012
AA seq 556 aa
MLRHLSIRDFVIVAALDLEFDRGFTVFSGETGAGKSILIDALALALGARADADVVRTGMA
RADITAEFAATAEAMRWLDDQALSNGEADEHGRDTVLLRRVVDANGRSRAFINGTQATLA
QLREVGEMLVDIHGQHAHQLLMRPDAQRTLFDTHAGLAAQAAKVAGAHRVWRDAAHALEL
ARTRDREIQLERERLAWQLAELDKLAPQPGEWDEISAEHRRLAHSASLIEGVRGTLDALS
EGDDAMLGQLGAMISRLRGLADIDPALGDALASLEPAEIQLREASYSLSHYAQRLELDPD
RLAQVEARLDALHSLARKFRLQPETLPAEHEARRAQLAALDAAADLDKLTAAVEAAREVY
LRDARQLSKARAKAAKALGAAVTTGMQELSMAGGSFEVALVPLAEGGAHGLEQIEFRVAG
HAGVPTRPLAKVASGGELARISLALAVIASTASPTPTLIFDEVDTGIGGGVAEVVGRLLH
QLGRDRQVLCVTHLPQVAARGDHHFQVAKAAASDGGTLSTVTPLDHANRIEEVARMLGGL
EITATTRRHAKEMLAA
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgctccgccatctttcgatacgcgacttcgtcatcgtcgccgcgctcgacctcgaattc
gaccgcggcttcacggtcttctccggcgaaacgggcgccggcaaatcgatcctcatcgac
gccctggcgctcgcgctcggcgcgcgcgccgatgccgatgtcgtccgcacaggcatggcc
cgcgccgacatcacggcggaattcgccgccacggccgaagcgatgcgctggctcgacgat
caggcgctttcgaacggcgaagccgacgagcacggtcgcgacacagtgctgctgcgacgc
gtagtggatgcaaacggccgctcccgtgccttcatcaacggcacgcaggccaccctcgcc
cagttgcgcgaggtgggagagatgctcgtcgacatccacgggcagcatgcgcatcaattg
ctcatgcgcccggacgcgcagcgcacgctcttcgatacccatgccggccttgcggcgcaa
gcggcgaaggtcgcgggcgcccatcgcgtctggcgcgacgcggcccatgcgctggagctc
gcgcgcacgcgcgaccgcgaaattcagctcgaacgcgagcgccttgcctggcagttggcc
gagctcgacaaactcgccccgcagcccggggaatgggacgagatcagcgccgagcaccgg
cggcttgcacattcggcgagcctgatcgaaggcgtgcgcggaacgctcgacgccctctcc
gaaggcgacgatgcgatgctcggccaactcggcgccatgatttcgaggctgcgcgggctt
gcggatatcgaccccgcgttgggcgacgcgctcgcttcgctcgaaccggccgagattcaa
ttgcgcgaggcgtcctattcgctctcgcattatgcgcagcggctcgaactcgatccggac
cggctggcacaggtcgaggcacggctcgacgcgctgcactcgctcgcgcgcaagttccgc
ctgcagcccgagacgctgccggccgagcacgaggcgcgccgcgcgcaactggccgcgctc
gatgccgccgcggacctggacaagctgacggcggccgtcgaggcggcgcgcgaagtctac
ctgcgcgacgcgaggcagctatcgaaagcccgtgccaaggcggcgaaagcgctcggcgcc
gccgtcaccaccggcatgcaggagctctcgatggccggcggcagtttcgaggtggcgctc
gtgccgctcgcggaaggcggcgcacatgggctcgagcagatcgagtttcgcgtcgcggga
cacgccggggtgccaacccggccactggccaaagtggcgtcgggcggtgaactcgcccgc
atcagccttgcattggcggtgatcgcaagcacggcgagcccgacgcccacactcatcttc
gacgaagtggacaccggtatcggcggcggcgtggccgaggttgtcggccgcctgctgcat
cagctcggccgtgaccggcaggtgctttgcgtcacgcatttgccccaggtcgcggcgcgc
ggcgatcaccatttccaggtcgccaaggcggctgcgtccgatggaggcacgctctcgacc
gtcacgccgctcgaccacgcaaaccggatcgaagaggtcgcccgcatgctgggcgggctc
gagatcacggcaacgacccgacgtcacgcgaaggaaatgctggcggcctga

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