Trinickia caryophylli: U0034_06035
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Entry
U0034_06035 CDS
T09722
Symbol
recN
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcar03400
]
U0034_06035 (recN)
DNA repair and recombination proteins [BR:
tcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
U0034_06035 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
U0034_06035 (recN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_22
RsgA_GTPase
nSTAND3
AAA_15
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
WQE12955
LinkDB
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Position
1:1326342..1328012
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AA seq
556 aa
AA seq
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MLRHLSIRDFVIVAALDLEFDRGFTVFSGETGAGKSILIDALALALGARADADVVRTGMA
RADITAEFAATAEAMRWLDDQALSNGEADEHGRDTVLLRRVVDANGRSRAFINGTQATLA
QLREVGEMLVDIHGQHAHQLLMRPDAQRTLFDTHAGLAAQAAKVAGAHRVWRDAAHALEL
ARTRDREIQLERERLAWQLAELDKLAPQPGEWDEISAEHRRLAHSASLIEGVRGTLDALS
EGDDAMLGQLGAMISRLRGLADIDPALGDALASLEPAEIQLREASYSLSHYAQRLELDPD
RLAQVEARLDALHSLARKFRLQPETLPAEHEARRAQLAALDAAADLDKLTAAVEAAREVY
LRDARQLSKARAKAAKALGAAVTTGMQELSMAGGSFEVALVPLAEGGAHGLEQIEFRVAG
HAGVPTRPLAKVASGGELARISLALAVIASTASPTPTLIFDEVDTGIGGGVAEVVGRLLH
QLGRDRQVLCVTHLPQVAARGDHHFQVAKAAASDGGTLSTVTPLDHANRIEEVARMLGGL
EITATTRRHAKEMLAA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctccgccatctttcgatacgcgacttcgtcatcgtcgccgcgctcgacctcgaattc
gaccgcggcttcacggtcttctccggcgaaacgggcgccggcaaatcgatcctcatcgac
gccctggcgctcgcgctcggcgcgcgcgccgatgccgatgtcgtccgcacaggcatggcc
cgcgccgacatcacggcggaattcgccgccacggccgaagcgatgcgctggctcgacgat
caggcgctttcgaacggcgaagccgacgagcacggtcgcgacacagtgctgctgcgacgc
gtagtggatgcaaacggccgctcccgtgccttcatcaacggcacgcaggccaccctcgcc
cagttgcgcgaggtgggagagatgctcgtcgacatccacgggcagcatgcgcatcaattg
ctcatgcgcccggacgcgcagcgcacgctcttcgatacccatgccggccttgcggcgcaa
gcggcgaaggtcgcgggcgcccatcgcgtctggcgcgacgcggcccatgcgctggagctc
gcgcgcacgcgcgaccgcgaaattcagctcgaacgcgagcgccttgcctggcagttggcc
gagctcgacaaactcgccccgcagcccggggaatgggacgagatcagcgccgagcaccgg
cggcttgcacattcggcgagcctgatcgaaggcgtgcgcggaacgctcgacgccctctcc
gaaggcgacgatgcgatgctcggccaactcggcgccatgatttcgaggctgcgcgggctt
gcggatatcgaccccgcgttgggcgacgcgctcgcttcgctcgaaccggccgagattcaa
ttgcgcgaggcgtcctattcgctctcgcattatgcgcagcggctcgaactcgatccggac
cggctggcacaggtcgaggcacggctcgacgcgctgcactcgctcgcgcgcaagttccgc
ctgcagcccgagacgctgccggccgagcacgaggcgcgccgcgcgcaactggccgcgctc
gatgccgccgcggacctggacaagctgacggcggccgtcgaggcggcgcgcgaagtctac
ctgcgcgacgcgaggcagctatcgaaagcccgtgccaaggcggcgaaagcgctcggcgcc
gccgtcaccaccggcatgcaggagctctcgatggccggcggcagtttcgaggtggcgctc
gtgccgctcgcggaaggcggcgcacatgggctcgagcagatcgagtttcgcgtcgcggga
cacgccggggtgccaacccggccactggccaaagtggcgtcgggcggtgaactcgcccgc
atcagccttgcattggcggtgatcgcaagcacggcgagcccgacgcccacactcatcttc
gacgaagtggacaccggtatcggcggcggcgtggccgaggttgtcggccgcctgctgcat
cagctcggccgtgaccggcaggtgctttgcgtcacgcatttgccccaggtcgcggcgcgc
ggcgatcaccatttccaggtcgccaaggcggctgcgtccgatggaggcacgctctcgacc
gtcacgccgctcgaccacgcaaaccggatcgaagaggtcgcccgcatgctgggcgggctc
gagatcacggcaacgacccgacgtcacgcgaaggaaatgctggcggcctga
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