KEGG   Trinickia caryophylli: U0034_06125
Entry
U0034_06125       CDS       T09722                                 
Name
(GenBank) HlyD family type I secretion periplasmic adaptor subunit
  KO
K11003  membrane fusion protein, hemolysin D
Organism
tcar  Trinickia caryophylli
Pathway
tcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0034_06125
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tcar02000]
    U0034_06125
   02044 Secretion system [BR:tcar02044]
    U0034_06125
Transporters [BR:tcar02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   U0034_06125
Secretion system [BR:tcar02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   U0034_06125
SSDB
Motif
Pfam: HH_CyaD Beta-barrel_AprE HH_AprE BSH_RND BSH_CusB BSH_YknX Biotin_lipoyl DNA_pol3_alpha Beta-barrel_RND_2 BSH_LcnD SPRY
Other DBs
NCBI-ProteinID: WQE12972
LinkDB
Position
1:complement(1355596..1357017)
AA seq 473 aa
MTPLRAQALFDLLRRYGAVFRTAWSIRRELDGQSRTSHELAFLPANLELVETPVHPLPRW
SMRLIVALAALAALVAAFGQLDIVAVAKGRLIPNDRIKVIQPALTGVVRRIVVHDGQRVR
AGDLLIELDTTQATADADKARASKIDAALTVARASALLQAQANGRSPAVAAAADASPADL
EQAQRFAEGVFEAFEDKLNGSRAELAKREAELATTREQIASLTATAPLARQQADRYHALA
ADKYVAQTDYLDKEQAALQKEHDLAAQQSRARELAAGIAEQKADIASTISQFRSTQLDTL
DKAAQQLKQSSQDETKADTRQKLMSLMAPVAGTVQQLSVHTLGGVVTTAQSLMEIVPDDS
IEVEVDIENKDIGFVKAGQSAAVKIDAFPYTRFGYLTGTVVSVPNDAVQDKRLGLKFVAR
VRLSTNRILANDQWIALTPGMTVTAEIKTGKRSVAHYFFDPVVEAGQESLHER
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgacgccgctgagagcccaggctttgttcgacctactgcgccgttacggtgccgtgttt
cgtacggcatggtcgattcgtcgcgaactcgacgggcaatcgcgcacgagccatgaattg
gcatttctgccggcgaaccttgagctggtcgagacacccgtgcatccgctgcctcgctgg
tcgatgcgcctcatcgtggcgctcgccgcactcgccgcgctcgtcgccgcgtttggccag
ctcgatatcgtggccgtcgccaaggggcggctcattccgaacgatcgcatcaaggtcatc
caacccgcgctcaccggcgtagtccgccgcatcgtcgtgcacgacgggcagcgcgtgcgc
gcgggcgatctgcttatcgagctcgatacgacgcaggcaaccgccgatgccgataaagcc
cgtgcttcgaagatcgatgcggcgctaaccgtcgcgcgtgcatcggcgctgctgcaagcg
caggcaaacggccgctcgccagccgttgcggctgcggcggatgcgtcgccggccgatctc
gagcaggcgcagcgcttcgctgagggcgttttcgaggcttttgaagacaaactaaacgga
tcgcgtgcggaactcgcgaaacgcgaggcggaacttgccaccacgcgcgagcagatcgcg
agcctgacggcgaccgcgccgctggcgcgtcagcaagcggatcggtatcacgcgctcgcg
gcggacaaatacgtcgcacagacggactacctcgacaaggaacaggctgcgctgcagaaa
gaacatgatctggcggcacagcaaagccgtgcacgcgagctggcagcgggaatcgcggag
caaaaagccgatatcgcctcgaccatctcgcagttccgcagcacccagctcgatacgctc
gacaaagccgcacagcagctcaagcagagcagccaggacgaaacgaaagccgatacacgt
caaaagctgatgtcgttgatggccccggtggctggcacagtccagcaattgtccgtgcat
acgctcggcggcgtggtgacgacggctcaatcgttgatggagatcgtccccgatgattcg
atcgaggtcgaggtcgatatcgaaaacaaggacatcggattcgtgaaagccggacaaagc
gcggcagtcaagatcgatgcgtttccgtacacacgattcggctatctgaccgggacggtc
gtatccgtaccgaacgatgcggttcaggacaagaggctcggcctcaagttcgtggcgcgc
gtgcgcttgtcgacgaatcggattttggccaacgatcaatggattgcgttgacgccgggc
atgaccgtcacggcagaaatcaagactggcaagcgcagcgtcgcacactacttcttcgat
cccgtggtcgaggcaggacaggaaagcctgcatgaacgataa

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