Trinickia caryophylli: U0034_06860
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Entry
U0034_06860 CDS
T09722
Name
(GenBank) ATPase, T2SS/T4P/T4SS family
KO
K02652
type IV pilus assembly protein PilB
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tcar02044
]
U0034_06860
02035 Bacterial motility proteins [BR:
tcar02035
]
U0034_06860
Secretion system [BR:
tcar02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
U0034_06860
Bacterial motility proteins [BR:
tcar02035
]
Pilus system
Pilus assembly proteins
U0034_06860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_30
AAA_22
AAA_16
nSTAND3
AAA_25
AAA_19
DEAD
AAA_23
AAA_11
AAA_7
AAA_14
cobW
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
WQE13106
LinkDB
All DBs
Position
1:1509594..1510814
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AA seq
406 aa
AA seq
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MSRSLSSPIATLPPADPDDVPAVRLLADTLARASALRASDIHVEPGEGNWRIRLRIDGVL
HETAHPPAHLRDGFVTRVKVLARLDIAERRVPQDGRLRLAVGPGSVEDYRVSSLPTLHGE
KLVLRRLDAMPADLSLAGLGFDPPQRLLVEAAIAAPHGLVIVTGPTGSGKTLSLYSFLQA
LNAHSRNLCTVEDPAEIQLPGINQVNVREKAGLTFAVALRALLRQDPDVIMVGEIRDGET
ADVALKAAQTGHLVLSTLHTNDAPGAIARLIDIGVAPYNLAAALRLVTAQRLVRRLCPHC
RARGAYCSTPLRAAGFADHELDGWMPFVAAGCAACHEIGYRGRIGLHQVMPVSARMRELI
AKRANTEAIGRQARAEGMQTLRQAALARVRDGSTTLEEALGATEPT
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctctctttcctctccgatcgccacgttgcctccggcagatccggacgacgtc
ccggccgtgcgcctgcttgccgatacgctcgcgcgcgcatccgccctgcgcgcgtccgat
attcacgtcgagcctggcgaaggcaactggcgcatccggttgcgcatcgacggcgtgctt
cacgaaaccgcgcatccgccggcccaccttcgggacggcttcgtgacccgcgtgaaagtc
ctggcccggctcgacatcgcggagcgccgggtgccacaggacgggcggctgcgcctcgcc
gtcggaccgggcagcgtggaagactatcgcgtgagctcgctgcccacgctgcatggtgaa
aagctcgtcttgcggcggctcgatgccatgcccgccgacctctcgctcgcgggactcggc
ttcgatccacctcaacgtctgctcgtcgaggcagcgatcgccgcgccgcacggcctcgtc
atcgtcacggggcctaccggcagcggcaagacgctctcgctctacagcttcctgcaggcg
ctgaacgcccattcacgcaacttgtgcaccgtcgaggacccggcggaaatccagttgccc
ggcatcaatcaggtcaacgtccgcgagaaagccggcctcaccttcgctgtggcgctccgg
gcgctgctgcgtcaggaccccgacgtcatcatggtcggcgaaatccgcgacggcgagaca
gccgacgtggcgctcaaggcggcccagaccggacacctcgtgctttcgacgctgcacacg
aacgacgcccccggcgcgatcgcacgtttgatcgacatcggcgtggcgccctacaacctc
gccgcggcgctgcgcctcgtcaccgcccagaggctcgtgaggcgcctttgtccgcattgc
cgcgcgcgcggcgcctattgcagcacgcccctgcgcgcggccggcttcgccgaccatgaa
ctcgacggctggatgccgttcgtcgcggcgggctgcgcggcctgtcatgaaatcggctac
cgcgggcgtatcggtctgcaccaggtgatgcccgtgtccgcaagaatgcgcgagttgatc
gccaagcgcgcgaacaccgaagccatcggacggcaggcccgagcggaaggcatgcaaacg
ctgcgccaagcggcgctggcgcgcgtgcgcgacgggtcgacgacgctcgaagaagcgctc
ggcgcaacggagccgacatga
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