Trinickia caryophylli: U0034_06865
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Entry
U0034_06865 CDS
T09722
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tcar02044
]
U0034_06865
02035 Bacterial motility proteins [BR:
tcar02035
]
U0034_06865
Secretion system [BR:
tcar02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
U0034_06865
Bacterial motility proteins [BR:
tcar02035
]
Pilus system
Pilus assembly proteins
U0034_06865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
WQE13107
LinkDB
All DBs
Position
1:1510811..1512055
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AA seq
414 aa
AA seq
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MNPTHFVYPSRGTDCVCAGQRRFIWRGVELDGRRRRGRLVAHNAATARARLKREGVVVLA
MRDGGPVKAPRTKARQITAFTRQLAGLLRAGLPLAQALEAIAQIPSKSAVPQIADALARA
LAAGERFAEALTRFPAQFDAPYRHMVAVGEASGALAGVLARVAHEREAAAALRAKLRAAL
IYPAAVLLFALAITSALLVWVVPTFRQVFESFGGVLPGPTRAVLAVSGLVTDLGAPVAAS
LGASYLVAARAVRGHCAARHALARMLLATPVIGGLLSVLAAVRWSRALGTLLSAGVPLAD
ALASLRDVTGNAVFDAASANIGSRLGQGERLAAAMRATCRFPAAFVAPIALAEEAGTLDS
TLLDVAALAEQELNEAVAMLASLAEPLVVIVLGALVGALVVALYLPVIELGNVV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgacacacttcgtctacccatcgcgcgggacggactgcgtgtgtgccgggcaa
cggcgcttcatctggcgcggcgtcgaactcgatggccggcgccgccgcggccggctcgtc
gcccacaacgcggcgacggcccgcgcaagactcaagcgcgagggcgtcgtcgtgctcgcg
atgcgcgacggcggcccggtaaaagcgccgcgaacgaaggccagacaaattaccgcattc
actcgtcagttggccggcctgctgcgcgcaggcctgccgctcgcgcaggcgctcgaagcg
atcgcgcaaataccatccaagtctgccgtgccgcagatcgcggatgcattggcgcgcgcg
ctcgccgccggcgagcgcttcgccgaagccctcacacgctttccggcccagttcgacgca
ccataccggcacatggtggccgtaggcgaagcgtccggggcactggcgggcgtgcttgcc
cgcgtcgcgcacgaacgcgaagccgccgccgcattacgggcaaagctgcgcgccgcgctg
atctaccccgccgccgtcctgcttttcgcgttggcgatcacgagcgccctgctcgtctgg
gtggtgccgactttccggcaagtgttcgagagcttcggcggcgtgctgcctgggcccacg
cgcgccgtcctcgcggtttccggacttgtgaccgatctcggtgcgccggtcgcggcatcg
ctcggtgcctcatatctggtggcggcccgcgccgttcgcggccattgcgcggctcgccat
gcgctggctcgcatgctgctcgccactccggtcatcggcgggctcctttcggtgctcgcg
gctgtgcgatggagccgcgccctcggcacgctgctcagtgccggcgtaccgctcgccgac
gcgcttgcctcgctgcgcgacgttacaggcaacgccgttttcgatgcggccagtgccaac
atcgggtcacgccttggtcagggcgagcggctcgctgccgcgatgcgcgccacgtgccgc
tttcccgccgccttcgtcgccccgatcgcgctcgccgaagaggcaggcacgctcgattcg
accctgctcgacgtggctgcgctcgccgagcaagagttgaacgaggccgtcgccatgctg
gcgagcctggcagagccgctcgtcgtgatcgtgttgggcgcgcttgtcggcgcgctcgtc
gtcgcgctttacctgccggtcatcgaactcggcaacgtggtgtag
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