Trinickia caryophylli: U0034_07000
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Entry
U0034_07000 CDS
T09722
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00061
Fatty acid biosynthesis
tcar00071
Fatty acid degradation
tcar01100
Metabolic pathways
tcar01212
Fatty acid metabolism
tcar02024
Quorum sensing
tcar04146
Peroxisome
Module
tcar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
U0034_07000
00071 Fatty acid degradation
U0034_07000
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
U0034_07000
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_07000
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcar01004
]
U0034_07000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcar04147
]
U0034_07000
Enzymes [BR:
tcar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
U0034_07000
Lipid biosynthesis proteins [BR:
tcar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
U0034_07000
Exosome [BR:
tcar04147
]
Exosomal proteins
Exosomal proteins of breast milk
U0034_07000
Exosomal proteins of breast cancer cells
U0034_07000
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WQE13132
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All DBs
Position
1:complement(1541537..1543261)
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AA seq
574 aa
AA seq
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MDKIWLKSYPPGVPAEIDPARYASVSELLDDSFREYRDKRAFVCMGKAITYGELDALSRK
FGAWLQSKGLARGARVAIMMPNILQYPVAMAAILRAGYVVVNVNPLYTPRELEHQLKDSG
AQAIVLLENFAATLQAVVRNTAIEHIVVASMGDLMGLKGPIVNFVVRRVKKMVPAWTLPG
HVKFNDALAAGAQRTFEPARLTAADIAFLQYTGGTTGVAKGATLTHGNIVANVLQSAAWH
EPAHTKRSDVDQIVNVIALPLYHIYALTVCCMLTIRTGGLGVLIPNPRDIAGMIKQLHGY
AINTFPAVNTLYNAMLNHPDFGKLDFSKLLVANAGGMAVQEAVAKRWFDRTHVPIVEGYG
LSETSPSAVCNPVTATEYNGTIGIPLPSTEVSIRDDDGNPVPTGQPGEICIRGPQVMAGY
WNRPDETAKVMTADGFFKSGDIGVMDERGFFKIIDRKKDMILVSGFNVYPNEIEDVVAKH
PGVFEVAAVGVPDEHSGEAVKLVIVKRDPSLTEADIQAFCKLQLTGYKRPKLIEFRTELP
KTNVGKILRRELRETRVASPASSPATPVAVERNV
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatctggctcaagtcgtatccgccaggcgttccagctgagatcgatccggcg
cgttatgcgtcggtgagcgagttgctggatgacagctttcgcgaataccgcgataaacgt
gcattcgtctgcatgggcaaggcgatcacctacggcgagctcgatgcgctatcgcgcaag
ttcggtgcgtggctgcaatcgaaaggacttgctcgcggcgcccgcgtcgcgatcatgatg
ccgaatatcctgcaatatccggttgcgatggccgcgatcctgcgagccggctacgtggtg
gtgaacgtcaacccgctttacacgccgcgcgaactcgagcatcaactcaaggacagcggt
gcgcaagcgatcgtcttgctggagaacttcgccgcgaccttgcaggccgtggtgcgaaac
acggcgatcgaacacatcgtcgtggcatccatgggcgacctcatggggctgaaggggccc
atcgtcaacttcgtcgtcaggcgcgtgaagaagatggtgccggcgtggacgctgcccggg
cacgtcaagttcaacgatgccttggccgccggcgcgcagcggacgttcgagccggcgcgg
ctgactgccgcggacatcgccttcctgcaatacacgggcggtacgacaggggtggcgaag
ggcgccacgctcacgcacggcaatatcgtggccaacgtgctgcaatcggccgcatggcat
gaaccggcgcacacgaagcgctcggacgtcgatcagatcgtcaacgtgatcgcgcttccg
ctctatcacatctatgcgctgacggtttgctgcatgctgacgatccgcactggcggcctc
ggcgtgctgattccgaacccgcgcgatatcgccgggatgatcaagcagttgcacggctac
gcgatcaatacgtttccggcggtcaacacgctttataacgcaatgctcaaccatcccgac
ttcggcaagctcgatttctcgaaactgctggtcgcgaacgccggtggcatggccgtgcaa
gaagcggtggcaaagcgctggttcgaccgcacgcacgtgccgatcgtcgaggggtatggc
ttgtccgaaacgtcaccgtccgccgtctgcaatccggttaccgccaccgaatacaacggc
acgatcggcattccgttgccgtccacggaagtgtcgatccgcgacgacgacggcaacccc
gtaccgacgggccagcccggcgagatctgcattcgtggcccgcaagtgatggccggctac
tggaatcgccccgacgaaacggccaaggtcatgacggcggacggcttcttcaagtcgggt
gacatcggcgtgatggacgagcgcggtttcttcaagatcatcgatcgcaagaaggacatg
attctcgtgtcgggcttcaatgtttatccgaacgaaatcgaggatgtggtcgcgaagcat
ccgggtgtgttcgaggttgccgcagtcggcgtgcccgatgagcattcgggcgaggcggtg
aagctcgtcatcgtcaagcgcgatccctcgttgaccgaagccgacatccaggcgttttgc
aagctgcagctcacgggctacaagcggcccaagctcatcgagtttcgaacggaattgccg
aagaccaacgtcggcaagatcctgcgtcgcgaactgcgcgagactcgcgtcgcgtcccct
gcgagttcgcccgccacgccggtggcggtcgagcgcaacgtctga
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