KEGG   Trinickia caryophylli: U0034_07670
Entry
U0034_07670       CDS       T09722                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_07670 (tssF)
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_07670 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WQE13246
LinkDB
Position
1:complement(1681423..1683267)
AA seq 614 aa
MEELLPHYERELSYLRRYAGHFAERYPKIAGRLAATGEHADDPHIEQMIKAIALLDARIG
RKLEHDYSQCVEALFDVLHPHYLRPFPACSIAQFSVAATHFGSGPCCKTLQRGTELISRT
INGVECRFKTAYDVTLAPLTISEARYSPAATAPVVVPLHAAGIVSITFESAAPKIDLCAL
GVRAVRLYLNGEPSFVAALADGLFIHALASYVELDSDRRWKPLAAVPIMQVGFGEEDALL
DYPTRSHPAYRPLSEYSGFQEKFDFADVDLGAMLDTAGACRRVTLHLILKEGHGNPLAGR
LLETLSAAHFKLFATPVVNLCQRPGEPIRVTHCELAYPVVADARHASAYDIYSIDAVRLV
RQTPEREAIIDFRPFFSLRYGEDEQHAYYWFAHRDEAVASMSPGYETEISVIDTGFDPTT
AQTDTLSLELTCTNRDLPSRLAVGLEGGDLFLDEGAGDGLVAGIAMLRRPTQTLRFERSD
ELPLRLTSHLALDHVSLTDMHAEALKAVLALYDLRRSVVSSRHIDGIVGIEPRDAVRELP
GNPFTTAVQGVEVRLTIDEGHFVGSSIATFVGAINTFLGYYVQLNSFVQLTVVSAHTGHE
IVRCRPRSCDLVFE
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggaagaactgctaccgcactacgagcgcgaattatcgtatttgcgccgctatgccggt
cactttgccgagcgataccccaagattgccggacggcttgcggccaccggcgagcacgcc
gacgatccgcatatcgagcagatgatcaaggcgatcgctttgctcgacgctcggatcggc
aggaaactcgagcatgattattcgcaatgcgtcgaggcattattcgacgttcttcacccc
cactatctgcggccgtttccggcctgttcgatcgcccagttttccgtggcggcaacacat
ttcggctccggcccatgctgcaaaacgctccaacgcggcacggagctgatcagccggacg
atcaacggtgtcgagtgccgattcaagacggcttacgacgtgacgcttgcgccgctaacg
atcagcgaggcgcgctattcgccggccgccaccgcccctgtcgtggtgccgttgcatgcg
gcggggatcgtctccattacattcgaatcggcagcaccgaagatcgatctgtgtgcgctc
ggcgtacgtgccgtgcgcctgtatttgaatggcgagccctcgttcgttgccgcgctcgcg
gacggtctcttcatccatgcgttggcaagctacgtggagctcgacagcgatcgtcgctgg
aagcctttggcggcagtgccgatcatgcaggtcggctttggcgaggaagacgcactgctc
gattatccgacgcggtctcatccggcataccgaccgctatccgagtattccggcttccaa
gagaagttcgatttcgccgatgtcgatctcggcgcgatgctcgatacggcaggggcatgc
cggcgggtgacgctgcatttgattctcaaggagggacacggcaaccccctcgctggacgg
ctgctggagacgttgtcggcggcgcatttcaagctgtttgcgacgcccgtcgtcaacctg
tgtcagcggcccggcgaacccattcgcgtgacgcactgcgaactcgcgtatccggttgtg
gcggatgcacgtcacgcgagcgcttacgacatttattcgatcgacgccgtgcgccttgta
cgccaaacgcccgagcgtgaggccatcatcgacttcaggccgttcttttcgctgcgatac
ggcgaagatgagcaacacgcatattattggttcgctcatcgcgacgaggcggtggcttcg
atgagtcccggctacgaaacggagatttccgtgatcgacaccgggtttgacccgaccacc
gctcaaacggatacgttgagccttgaactcacctgtaccaaccgggacctaccgtcgagg
ctcgccgtggggctcgagggtggcgaccttttcttggacgagggtgctggcgacggcttg
gtggccggtatcgcgatgctccgccggccgacgcaaaccctgcgtttcgagcgcagcgac
gagttgccgttgcggctgacctcgcacctggcgctcgaccatgtttctctgacagatatg
cacgccgaagcgctcaaagcagtgctggcgttatacgacctgcggcgttccgtcgtatcg
tcgcgtcatatcgacggaatcgtgggcatcgagccgcgcgacgccgtgcgggagctgccc
ggcaacccgtttacgacggccgtgcaaggtgtcgaagtgcgtttgaccatcgacgaaggc
catttcgtcggaagcagcatcgcgacgttcgtgggcgcgatcaatacgtttctcggatat
tacgtccagctcaacagctttgtgcaattgacagtcgtgtcggcgcatacgggccacgag
atcgtgcggtgcaggccgcgcagttgcgatttggtgtttgagtaa

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