Trinickia caryophylli: U0034_07895
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Entry
U0034_07895 CDS
T09722
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00300
Lysine biosynthesis
tcar00470
D-Amino acid metabolism
tcar01100
Metabolic pathways
tcar01110
Biosynthesis of secondary metabolites
tcar01120
Microbial metabolism in diverse environments
tcar01230
Biosynthesis of amino acids
Module
tcar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U0034_07895 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U0034_07895 (lysA)
Enzymes [BR:
tcar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
U0034_07895 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
WQE13284
LinkDB
All DBs
Position
1:1729536..1730798
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AA seq
420 aa
AA seq
DB search
MSQSAFRYVDGVLHAEGVSAVALADQFGTPLYVYSRAELTRAYGAYAQACAGRRASVHFA
VKANSNLAVLNVFARLGAGFDIVSGGELARALAAGGKAERIVFSGVGKSADEMREALNAG
VKCFNVESIPELDRLDAVAGELGKKAPVSLRVNPDVDPKTHPYISTGLKANKFGVAFDEA
RAVYRNAAAMPHLDVVGIDCHIGSQITEIAPYLDALDKLLDLVEQIEADGTTIEHIDVGG
GLGITYDDETPPDTALFVRTLLDRIEARGHGHREVFFEPGRSLTGNAGVLLTRVEFLKPG
AEKNFAIVDAAMNDLARPAMYQAYHAIEPVVPRSAASRVYDVVGPVCESGDWLGRERSLA
IAPGDLLAVRSAGAYGFVMSSNYNTRPRAAEVMVDGTEAHLVRPRETVRELFATETILPR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatccgccttccggtacgtcgacggtgtgctgcacgccgaaggcgtcagcgcc
gtcgctctggccgaccagttcggcacgccgctttatgtctattcgcgcgcggagctcacg
cgtgcctacggagcctatgcgcaggcgtgcgcgggccgccgcgcatccgtgcactttgcg
gtgaaggcgaacagcaacctcgccgtgctcaatgtgttcgcccggctgggtgccggcttc
gacatcgtgtccggcggcgaactcgcacgcgcactggccgccggaggcaaagcggagcgc
atcgtgttttcgggcgtcggcaagagcgccgatgaaatgcgcgaagcgttgaacgcaggc
gtgaaatgcttcaacgtcgagtcgattccggaactcgacaggctcgacgcggtggccggc
gaactcggcaaaaaggcacccgtctcgctacgcgtcaaccccgacgtcgatccgaaaacg
cacccgtacatctcgaccggcctcaaggcgaacaagttcggcgttgccttcgacgaagca
cgcgcggtctatcggaacgccgccgcgatgccgcatctcgacgtggtcggcatcgactgc
catatcggttcgcagatcaccgaaatcgcgccctatctcgatgcgctcgacaagttgctc
gacctcgtcgagcaaatcgaggccgacggcacgacgatcgagcacatcgatgtgggcggc
ggcctcggcatcacgtatgacgacgaaacgccgcccgacacggcgctcttcgtgcgaacg
ctgctcgaccgtatcgaggcgcgcggccacggtcaccgcgaggtgtttttcgagccgggc
cgctcgcttacgggcaacgcaggcgtgctgctcacgcgcgtagagttcctgaagccgggc
gcggaaaaaaacttcgcgatcgtcgacgctgccatgaacgacctcgcccgcccggcgatg
taccaggcgtatcacgcgatcgagcccgtggtgccgcgcagcgctgcatcgcgcgtgtac
gacgttgtcggccccgtgtgcgaaagcggcgactggctgggccgggaacgctcgctcgcc
atcgcgcccggcgatctgctcgccgttcgctcggcgggcgcctacggcttcgtcatgagc
tcgaactacaacacgcgcccgcgggcggccgaggtgatggtcgacggtaccgaggcgcat
ctcgtgcgcccgcgtgagacggtacgcgaactcttcgcgactgaaacgatcctgccgcgc
tga
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