Trinickia caryophylli: U0034_07930
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Entry
U0034_07930 CDS
T09722
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00860
Porphyrin metabolism
tcar01100
Metabolic pathways
tcar01110
Biosynthesis of secondary metabolites
tcar01120
Microbial metabolism in diverse environments
tcar01240
Biosynthesis of cofactors
Module
tcar_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
U0034_07930 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcar04147
]
U0034_07930 (hemB)
Enzymes [BR:
tcar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
U0034_07930 (hemB)
Exosome [BR:
tcar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
U0034_07930 (hemB)
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
WQE13289
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All DBs
Position
1:1738209..1739207
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AA seq
332 aa
AA seq
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MSLYPLHRPRRMRRDDFSRRLMRETVLTTNDLIYPVFVVEGDNVKQAVPSMPGVERVSID
LLLGVGEQCVELGVPVLSLFPAIDPSLKTPDGREAANPDGLIPRAVRALKARFPELGVLT
DVALDPYTSHGQDGVLDETGYVINDETVEILIDQARTQAEAGVDIVAPSDMMDGRIGALR
EMLESDGHIHTRIMAYAAKYASAFYGPFRDAVGSATNLGKSNKMTYQMDPANSDEALREV
RLDIDEGADMVMVKPGMPYLDIVRRVKDEFRFPTYVYQVSGEYAMLKAAAQNGWLDHDKV
MMESLLAFKRAGADGVLTYFALDAARLLRAQR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttatccgcttcaccgcccgcgccgcatgcgccgcgacgatttctcgcgacgc
ctgatgcgcgagaccgttctcacgaccaacgacctcatctacccggtattcgtcgtcgaa
ggcgacaacgtcaaacaggcggtaccgtcgatgccgggcgtggagcgtgtctcgatcgac
ctgctgctcggcgtcggcgagcagtgcgtcgagcttggcgtgcccgtgctttcgcttttt
cccgccatcgacccgtcgctgaaaacgcctgacggccgcgaagccgccaacccggacggc
ctgatcccgcgcgccgtgcgggccctgaaggcgcgctttcccgaactcggcgtgctcacg
gacgtcgcgctcgacccctacacgagccacggccaggacggcgtgctcgacgaaacgggt
tacgtcatcaacgacgagacggtcgaaatcctgatcgatcaggcgcggacccaagccgaa
gcgggagtcgacatcgtggcgccgtccgacatgatggacgggcgcatcggcgcactgcgc
gaaatgcttgaaagcgatgggcacatccacactcgcatcatggcctacgcggccaaatac
gcatcggctttttacggcccgttccgggatgcggtcggctcggccacgaatctcggcaag
agcaacaagatgacgtaccagatggacccggccaattcggacgaagcgctgcgcgaagtc
cgactcgacatcgacgaaggcgccgacatggtcatggtcaagcctggcatgccgtacctc
gatatcgttcgccgcgtcaaagacgaattccgcttcccgacatacgtctatcaagtgagc
ggcgagtacgccatgctgaaggccgccgcgcaaaacggctggctcgaccacgacaaggtc
atgatggaatcgctgttggccttcaagcgggccggcgccgatggcgtgctgacctacttc
gcgctcgacgctgcgcgcttgctgcgcgcgcagcgatag
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