KEGG   Trinickia caryophylli: U0034_08020
Entry
U0034_08020       CDS       T09722                                 
Symbol
rplE
Name
(GenBank) 50S ribosomal protein L5
  KO
K02931  large subunit ribosomal protein L5
Organism
tcar  Trinickia caryophylli
Pathway
tcar03010  Ribosome
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    U0034_08020 (rplE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tcar03011]
    U0034_08020 (rplE)
Ribosome [BR:tcar03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Large subunit
    U0034_08020 (rplE)
  Bacteria
    U0034_08020 (rplE)
  Archaea
    U0034_08020 (rplE)
SSDB
Motif
Pfam: Ribosomal_L5_C Ribosomal_L5 DUF1322
Other DBs
NCBI-ProteinID: WQE13307
LinkDB
Position
1:complement(1749530..1750069)
AA seq 179 aa
MARLQEFYKEKVVPGLIEKFGYKSVMEVPRITKITLNMGLGEAVADKKIIETAVGDLTKI
AGQKPVVTKARKAIAGFKIRQGYPIGAMVTLRGRAMYEFLDRFVTVALPRVRDFRGVSGR
AFDGRGNYNIGVKEQIIFPEIDYDKIDALRGLNISITTTAKTDDEAKALLASFKFPFRN
NT seq 540 nt   +upstreamnt  +downstreamnt
atggctcgtttgcaagagttttacaaagagaaggttgtacccggcctcatcgagaagttc
ggttacaagtcggtcatggaagtgccgcgcatcaccaagatcaccctgaacatgggtctt
ggcgaagccgtcgcggacaagaagatcatcgagaccgccgtgggcgacctcacgaagatc
gccggccagaagcctgtcgttacgaaggctcgcaaagcaattgccggcttcaagattcgt
cagggttacccgatcggcgcgatggtcacgctgcgtggccgcgcgatgtacgaattcctc
gatcgtttcgtcacggtggcactgccccgcgtgcgtgacttccgtggtgtgtcgggtcgt
gcgttcgacggtcgcggcaactacaacatcggcgtgaaagagcagatcattttccccgaa
atcgactacgacaagatcgacgcgctgcgtgggctgaacatcagcatcacgacgactgcg
aagactgacgacgaagccaaggcactgctcgccagcttcaagttcccgttcagaaactga

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