Trinickia caryophylli: U0034_08320
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Entry
U0034_08320 CDS
T09722
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_08320
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
U0034_08320
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Ortholog
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GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
HTH_11
HTH_22
HTH_36
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
WQE13355
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All DBs
Position
1:1809325..1809939
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AA seq
204 aa
AA seq
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MEPATPALRLTDRKHVAIIDAAIEEFRAAGFEATSMDRIAARANVSKRTVYNHFPSKEAL
FAAILRQLWEASQKGTPLAYRADEPLRPQLLALLTRKLRLLDDEAFLSLARVAIAAGIHS
PERARDMVARMGEREEDLTTWVRAAAADGRLRAPDPVFAALQLQGLVKAFAFWPQVTMGQ
PRLTEDEQRRVAESAADLFLAHYG
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgccacacccgctttgcgcctgaccgaccggaagcacgtcgccatcatcgat
gcggcgatcgaggagttccgcgccgctggcttcgaggcgacgagcatggaccgtatcgcg
gcccgtgcgaacgtctccaagcgcacggtctacaaccatttcccgagcaaggaagcgctt
ttcgcggccatccttcgccaactgtgggaagccagccagaaaggcacgccgctggcctac
cgtgccgacgaaccgttgcgcccgcagttgctggcactgctgacgcgcaaattgcgcctg
ctcgatgacgaagcattcctgtcgctcgcgcgtgtggcgatcgcggccggcattcactcg
cccgaacgcgcgcgggacatggtcgcgcgcatgggcgaacgcgaggaagatctgacgacg
tgggtgcgggcggccgcggccgatggccggctacgcgcgccggacccggtcttcgccgcg
ttgcagttgcaagggctcgtcaaggcgttcgctttctggccccaagtcacgatggggcag
ccgaggctgacggaagacgagcaacgccgcgtggccgaatccgccgccgacctcttcctc
gctcactacggctga
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