KEGG   Trinickia caryophylli: U0034_08335
Entry
U0034_08335       CDS       T09722                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_08335 (tssF)
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_08335 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WQE13358
LinkDB
Position
1:1816860..1818674
AA seq 604 aa
MTEDDTLRYHYEKELALLRRSLRAFADRYPRAAVRLSIVGEHSEDPHVERLLQSFAFLAA
RISAKLGDDYPEFTEALLGTLNPLYLRPFPSCAIARFGTSSQFDSQTAPAVIDRGTELLS
NVGKCSFRTVYDVVLAPLRISAAKYAHTPTAPSHISLPPDTSGLLSITFSSSQAGKRLDS
TALPVLRVHLAGTSETVASLTDTMLLRSAMAFVEDGTGRWTPLQAVPIKAAGFGPRESLL
EWRNRHLPPSELLAEYFSFADRFHFVDIDLAAIVAAGEPSAQLTLHLAIADVHRDSWAAQ
RLAPVSAENLQLFCTPVVNLFPLANVPLKYDNATGAWPIEVTHTSGALTEVWALDLVRTD
DGRRVPPFTSLAHGSSPGLAGPWWTFMQWRIPESPEKTRPASLTLVDLNGRESNAGILAL
SVDATCSNGDVPRSLPVGAPGGDLQMEGNPLVGRIALLRPPTPVARLPRGDGALWRLISQ
QTPHAVNLSLEGLAALKSLFRQFAALSATHSPHIEGIMHLACKPIMEWIVMQPQPIFVRG
LEITLTVDDSAFASTSIATFASVMERFFTPYAPETSFVKLIVASANNGWVIRRGEPVAGS
APIV
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgaccgaagacgacacgctgcgttatcactacgaaaaggaactcgccctgttgcgccgc
tcgctacgggcgttcgcagaccgctatccgagagcggccgtgcggctgtcgatcgtcggc
gagcattccgaagacccgcatgtcgagcggcttttgcaatcgttcgcgtttttggctgcg
cgcatcagcgccaagttaggcgacgactacccggagttcaccgaggcgctgctcggaacg
ctgaacccgctatacctgcggccgtttccctcgtgcgcgatcgcgcggttcggcacgtcc
agtcagttcgacagccaaaccgcgcccgccgtcatcgaccgcggaacggaactgctttcc
aacgtcggcaaatgcagcttccgcaccgtgtacgacgtcgtgctggccccgttgcggatc
tcggcggcgaagtacgcacatacgcctaccgcgccgagccatatttcgttaccgccagat
acgagcggcctcctttccatcacattcagctcgtcacaggccggcaagcggctggatagt
accgccctgcccgtattgcgcgtacatctcgccggtacgagcgaaaccgtggcatcgctc
accgatacgatgctgctgcgcagcgcgatggcattcgtcgaggacggcacgggccgctgg
acaccattgcaagccgtgccgatcaaggcagccggcttcggcccgcgcgaaagtcttctc
gaatggcgcaaccgtcacttgccgccgtccgaactgctggccgaatatttctcatttgca
gaccgtttccatttcgttgatatcgatttggcggcaatcgtcgcggcaggcgagccgagc
gcacaattgacattgcacctggccatagcggatgttcatcgcgactcctgggccgcacag
cggctcgctccggtatccgcagagaatctgcaactgttctgcacgccggtggtcaacctg
tttccactcgcgaacgtaccgctcaagtacgacaacgcgaccggggcatggcccatcgag
gtcacccatacgagtggcgcgctcaccgaggtctgggcgctcgatctcgtgcgcacggac
gatggccggcgtgtgccgcccttcacgtcgctcgcgcacggaagctctcccgggcttgcc
ggcccttggtggacgttcatgcagtggcggatccccgagtcgccggagaagactcggccc
gcgtcgctcacgctcgtcgatctgaacgggcgcgaatccaacgccggcatcctggcattg
tccgtcgacgctacctgctcgaacggcgatgtgccgcgttctctacctgtcggcgcaccc
ggcggcgatctgcaaatggagggcaatccgctcgtcggccgcatcgcacttctacgaccg
cccacacccgtcgcgcggctgccacgtggcgacggcgcgctctggcgcctcatctcccaa
cagacgccgcacgcagtcaacctcagtctcgaagggctcgccgcactgaaaagtctgttt
cgccaattcgcagccctttccgccacccactcgccccatatcgaaggaatcatgcatctt
gcatgcaagccgataatggaatggatcgtgatgcaacctcagccgatcttcgtgcggggt
ctcgaaatcacgcttactgtggatgacagcgcgttcgcgtcgaccagcatcgcaaccttc
gcgtccgtaatggagcgattcttcaccccctatgcgccggaaaccagctttgtaaagctg
atcgtggcttccgcaaataacggctgggtcattcgacgcggcgaacctgttgcggggagc
gcacctatcgtctaa

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