KEGG   Trinickia caryophylli: U0034_08505
Entry
U0034_08505       CDS       T09722                                 
Name
(GenBank) lytic transglycosylase domain-containing protein
  KO
K03194  type IV secretion system protein VirB1
Organism
tcar  Trinickia caryophylli
Pathway
tcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0034_08505
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_08505
Secretion system [BR:tcar02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   U0034_08505
SSDB
Motif
Pfam: SLT PilA4
Other DBs
NCBI-ProteinID: WQE13390
LinkDB
Position
1:1860514..1861356
AA seq 280 aa
MNTGLRVRRMLAFGLACAALVLANPSADARAGAPSAQSPAFVLLARTCAPNVDASTLSAL
VRTESGFNPFAIGVVGAHLSRQPASLAEALATVAELEARGYSYSVGLTQVNNRNFAKYGE
TAASLFEPCRNLRVGGAILTECFARSSRAAAGTQLALRAALSCYYSGNFTTGFSSGYVAQ
VVSNARRDALRSGAEPIPLVRDPGGAPVRPRPAVRPVAAPGPAATAAGDAPAALPIAPKA
TPAPVRSSSPSCHGRPLVMVCRGLSAARIRSLCVRCLDAN
NT seq 843 nt   +upstreamnt  +downstreamnt
atgaacacggggctgcgcgtgcgccggatgctcgcattcggactcgcctgcgcggcgctc
gtgctcgcaaacccgagtgccgacgcacgggcgggggccccctccgcgcaaagcccggcc
ttcgttttactcgcccgcacctgcgcgccgaacgtcgacgcgagcacgctctcggcgctc
gtgcgcaccgagtcgggcttcaatcctttcgcgatcggcgtggtgggcgcgcacctctcg
cgccagccggcctcgctcgccgaagcgctcgcgaccgtggccgagctcgaagcgcgcggc
tacagctacagcgtcggcctcacccaggtcaacaatcgcaacttcgccaaatacggcgaa
acggcggcttcgctcttcgagccgtgccgcaatctgcgtgtcggcggcgccatcctcacc
gagtgcttcgcccgctccagccgcgccgcggcaggcacgcaactggcgttgcgcgcggcc
ctgtcctgctactacagcggcaacttcacgaccgggttctcgagtggctacgtcgctcag
gtcgtctcgaatgcgcggcgcgatgcgctgcgctcgggtgccgagccgatcccgctcgtg
cgcgacccgggcggtgcgcccgttcgcccccgccccgccgtgcgtccggtcgcggcgccc
ggccccgccgccacggccgcgggcgatgctcccgccgcgttgccgatcgcgcccaaagcg
acaccggcgccggtccgcagcagctcgccgtcatgccatggccggccgctcgtcatggtc
tgccgcggcctgagcgcggcgcgaatccgctcgctgtgcgtgcgctgcctcgacgcaaac
tga

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