Trinickia caryophylli: U0034_08735
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Entry
U0034_08735 CDS
T09722
Name
(GenBank) hemagglutinin repeat-containing protein
KO
K15125
filamentous hemagglutinin
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tcar00536
]
U0034_08735
Glycosaminoglycan binding proteins [BR:
tcar00536
]
Heparan sulfate / Heparin
Microbial pathogens
U0034_08735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
ESPR
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
WQE13432
LinkDB
All DBs
Position
1:complement(1919940..1929503)
Genome browser
AA seq
3187 aa
AA seq
DB search
MNSGAYRLVFNKLRGMLVAVEETASSVGNAGRGEFAVRVAAGRRVISLFALRHMAFAASL
LAGTVPVAHAQIVAAQGSGASVIQTANGLPQVNIAKPSGAGVSVNTYSQFDVQKNGAILN
NSATVVATQQAGYINGNPNLQPGLPAKIILNQVNSNSPSQLRGYLEVAGSRAEVVIANSS
GLIVDGAGFINTSRAILTTGAPVFGANGALSGFDVRGGSIFVQGAGLNASNVDQVDLIAR
AVQANAAVYGNTLNVVAGSNHVDHDTLTATPITGDGAAPSLAIDVGQLGGMYANRIFLAS
NEFGVGVSNRGVIAAQAGDLTLTARGRLQLAGRTNASGNMALAARDEIDNSGSTYALQDV
SVTTAAALENAGTLAAQRNTTIDVGSVASTGALGAGVDGDGSIARAGDLTVTAAGAISAT
GHNVAGGDASFSAASIDLAGGETSSNGNLELSAGAGDLNQAHATTAAGGTLSVSAKGTLT
NDNAVLSSSGKQTITAGELSNLSGQILSQSAIELDARGAVNNRQGVIQASGRMKINAASI
GNTAGRVTSLNGDGLTVSTTGRLVNASGTAGTGDIGGVIGTNGALRLTSGELSNQGQISA
KGNASVQAQSLNNHAGSVIAAGDLNATIAGTLDNRNGLISGAAATVTAASADNRGGKIEG
DALALSTTADPVNRGGTVQQYGLADQRISVGGKFDNTGGTVASNASNLSVSAQTLINDSG
ALDDAGNGVLRLTAAAISNTGGRVVTDGALDISGGALENQGTISAKGDAQLHAQSFDNHS
GKLIAAGEIGATIANTLDNRNGLVSAAATHVSAASADNSSGTIEGHLLTVSTAGDLVNRE
GTLRQYGLANEVISAGGTLDNSGGTIASNASNLALSAQSIANGTSGSIQHAGAGSLTLTA
SDLLSNAGGQIATNGKLTAHALSLDNTSGSLSAQGAMELDAAAGILNRSGTVYGKDGLTA
TTQGGLDSTAGSMQTAGDLSLTAGGALTNARGVMSANGLHGTMLIAAANIDNTSGTLTDA
GDGAMAITAAAGVTNTGGTMGGNGDVTIAARSFTNTSGAKLVAAGAANLDVTESVNNAGG
TIYGGTALNLNQAGAKLTNDGGTLEGGADVSARVSSLSNAGGAIRANRDIAASGAVSGVG
EVTSGRNLTLSATGNYTNDAANRLHADGDMSVSATGTLTNAGTLAAAGSLTASGGQVVNA
AGARMTSSATTVNASGVLANAGRIEGDAVRTNSAALMNTGTVIGNDVQVNAADIQNSGAA
AVIAGAQSVKLYASNSVSNMDGALIYSAGDLEIAQDGTRDSTGMLAHQTGTLENSSADIE
ADGNLDIAAHTIVNKRTTIVTEPGAPQTATSEWSIWTAGLEIGDDTKHRNSITFPQWRWS
GEADPLSGNMAGALRTPVSVTLPKSQVVNVDTGAQTFSLTQPITETRFPDLTACVSNCNT
NVDMLHSQVATNPTQWYQNIQDNGDTYTITFWPDWNPNTQIRPDQVRVRTDLGSDSHDYV
EKRRVTTITTTTDRLVSASDAAKIRARGEIRINADGGSITNQSSIMAAGGDLVRRATNGS
VRDVGIVLQQTVTEQDTSTFYWHQKTGNSEDTKTVIYPVTPVASTTVAALPAIATANQAV
QTDAATITVSSVNRVGQTVTGSGVTGGDATGTLLGGVTGQTTEVRATTGVMGQRARVNVA
DGATGGASRPQTLGSASSGIPNLTLPVNGLFAVQTAPSATYLIATDPRFTSYNNFISSDY
MLSALNLNPQTTQKRLGDGFYEEKVIRDQVTQLTGRTFLAGYSDNLAEYTALMNSGVTYA
KQFGLTPGVALSDTQMKQLTTDMVWLVSQDVTLPDGTQQSVLVPKLYLAQADTVDLQHSG
ALVAGKSVSLDATGDVANRGHIVGDVATTVLGNNIVNRGVIGSGGTTTVAAVQDVRNVSG
RIGGADTMVRAGRDIVNESETFGVTQTLRDGNLVSTATSQGTLATGTISASRDAALIAGR
DVTLAGASIQTGGNAMLAAGRDIDVGTVTLAATQEVHTDDGLSGGHDNLTKNVGSSIVTG
GSLTAISGRDTTVTGSTVQAAGDASMIAGNDLTVTAAKDIQTHDERSLGGRLTQHTASSY
DETARASDINASGTVLLGAGQAGTAATLLALEGVSAAASPSSGGNMKVLGSSVTTGTTAT
DGSVNGGAVKLVATGDVTVGAVTETHDSQSWTHDSHSGFLSSSTMTDEKSSHQIVSAGST
VSGDVVAASAGHDLIVAGSTIASTHDLSLSAVHDLNIVTTQDTSQSSHFHEETSSGLGAG
GGAGISYGNTDSKDTVHDNAITQNGSIVGSTGGSVTLVAGNNLHVTGSTAIAAQDVLGQA
ANVTIDSATSTNHHDETHETKTSGFTLGLSGSIGNAIMTAASESRAASNSKDGRASALHS
IAAAGAIGNAGAAMALNPGKTPDIGVQLSFGTSESKSTSKEDQTTQTGSAIDAGGTVAFV
ATGDGTQGSGNVTVAGSDIKATDVLLDAKNQVNIVNTTNTDATRSSNSSSSASVGVSYSF
GSGFGISASMSNAHGDANSDAVMQNNSHVSASNSVAVRSGGDTNIVGSDVAGRLVKVDVG
GDLNVASVQDTTVSAAHQSSSGGGFSISQYGGASASFSAQRGNAAGNYAAVVEQAGIKAG
DGGYAIDVKGNTDLKGAYVASDADASKNSLTTGSLSFSDIENHSHYSANSAGVTVGGAGM
GIVPMIPQFANGDENALTKSAVSAGAITLTDAASQKQNLGALDRDTSDLNGTVSKLPDIN
DMLSQQSDLMNAANAAGAQVAQAIGTYSDYKKARAEDGAKAASLLGEADLAEQYKDEAKP
WAEGGADRIGLHILGGAMLGGLGAGGAAGAFGGAAGAGVSAGLAPKLNEMADDFGAPGTL
GHALGNGLGNLIAAAAGAAVGGGAGAATASLADLYNRQLHPDERRWAKDNAGRFAQFYKD
KTGQDITDDQAQQMLLANGYRLVDAAASKGPGGDATAVAYISQNSNGLFRATTAEYNSPF
LHGNKDGSLTPEQRSLPGHEANPQFGMAAGAAVGLFTLGAVAPTAATAWALGATYDYAGD
VISHAMGLSNDGPNVGKSLAVGGVTGAAAPFFLPLNTLGNATGGKVAVGVYNALWGGVGA
FGATAMTNPGSSADLSAGIGTASSLFGAGVEAKMPGPIGMSINQLLQVLSGPTQAAIEAD
KQKISGK
NT seq
9564 nt
NT seq
+upstream
nt +downstream
nt
atgaattccggggcttatcggcttgtattcaacaagctgcggggaatgcttgtcgccgtc
gaggaaacggcttcgtcggtcggcaatgcaggtcgtggtgaattcgcggtacgggtagcg
gcaggtcgtcgcgttatttcgcttttcgcattacgccacatggctttcgcggcgtcgttg
ctcgcgggcactgttcccgtggcacatgcgcaaattgtcgcagcccagggctctggcgcc
agcgtcatccaaacagcgaacggcttgcctcaggtcaacatcgccaagccgtcgggcgca
ggggtgtcggtcaacacctactcgcagttcgacgtccaaaagaatggcgcgatcctgaac
aactcggcaacggtcgttgctacgcagcaggccggctacatcaacggcaacccgaatctt
cagcccggcctgccggcgaagatcatcctcaaccaagtcaacagtaattcgccgtcgcaa
ttgcgcggctacctcgaggtggcaggcagccgcgccgaggtggtgatcgccaattcgtcg
ggtttgatcgtcgatggcgcaggcttcatcaatacatcgagggctattctgacgaccggg
gcaccggtgttcggtgccaatggcgcgctttcgggcttcgatgtccgaggcggcagcatc
ttcgtgcaaggcgccgggctcaacgcatcgaatgtcgatcaggttgatctcattgcccgc
gcggtgcaggcgaatgcggcggtctacggcaatacgctgaacgttgtcgctggctcgaat
catgtcgaccacgatacgcttaccgctacgcctattaccggtgacggcgctgcgccgtca
ctcgcgatcgacgtcgggcaactcggtggcatgtatgcaaaccggatatttcttgcgtcc
aacgaattcggggtgggcgtatcgaatcgcggcgtcatcgctgcccaggccggtgacctg
acgctcaccgctcgagggcgcctgcaactggctggccgaacgaacgccagcggtaatatg
gccctcgcggcacgggacgaaattgacaacagcggttcgacctacgcgctgcaggatgtt
tcggtaacaacggccgccgcgctcgagaacgccggcacgttggccgcgcagcgaaatacg
acgatcgacgtcgggagcgtggcatcgacgggtgcgctcggcgcaggtgtcgacggcgac
ggttccatcgctcgagccggggatctgacggtcactgcagccggcgcaatatcggccact
ggtcacaacgtggcaggcggcgatgcatcgttttcggcggcgtctatcgaccttgcgggc
ggtgaaacgtcatccaacggcaaccttgaactgagtgcgggcgctggtgatctgaaccag
gcacatgcgacgacggcagcaggcggcacgctttccgttagcgcgaaaggaacgctgacc
aacgacaacgcggttctttcctcgtcgggcaagcagacgattacagcaggggagttgtcg
aacctgtccggccagatcctttcgcaatcggccatcgagttggacgcgcgcggggcggtg
aataatcgtcaaggcgtcattcaggcgtccgggcgcatgaagataaacgcggcgtctatc
ggcaacacggctggacgtgtgacctcgctgaacggtgacgggttgacggtctccacaacc
ggtagactcgtcaatgcgtcgggaacggcgggcacgggcgatatcggcggggtgatcggc
accaacggtgcgctgagactgacgagcggcgagctttccaatcaagggcaaatcagcgca
aagggcaatgcatcggtgcaagcccaatcgcttaacaaccacgcgggtagcgttattgcc
gcaggcgatctcaatgccactatcgccggcacactcgataatcgaaacggcctgatctcc
ggagcggctgccacagtaacggcagcgtcggcggataacagaggtggcaagatcgagggc
gatgcgcttgccctctcgactaccgccgaccccgtcaatcgcggcggaacggttcaacag
tatggactagccgatcagcgcatatcggtgggaggcaagttcgacaacaccggtggcacc
gttgcttcgaatgcgtcgaatctatcggtgtccgcgcagacgctcatcaacgatagcggc
gcgctcgacgatgccggtaatggcgtgcttcgcctcactgcggcagcaatttcgaacacg
ggcggcagagtcgttaccgatggtgcgcttgacatctcgggtggggcactcgagaaccag
gggacgatcagcgcgaaaggcgatgcgcaattgcacgcgcagtcgttcgacaatcattcg
ggcaagctgatcgctgcaggcgaaatcggcgcgacgattgcgaacacactcgataatcga
aatgggctcgtctcagcggcggcaactcacgtgagcgcagcgtctgcggacaacagcagt
ggaactatcgagggccacttgcttaccgtctccacggctggcgatctcgtcaatcgtgag
ggcacgctgcgccagtatggactggcgaacgaagtcatatcggccggcggcacgctcgac
aacagcggcgggacgatcgcgagcaacgcgtcgaaccttgcgctatcggcgcagtcgata
gcgaatgggaccagcggatcgattcagcatgcgggggcgggttcgctcacgctgaccgca
tcggatttgctgtccaacgcgggcggacagattgcgaccaacggcaaattgacggcgcat
gcgctgagcctcgacaacacgtccggttcgctttctgctcagggcgcgatggaactcgac
gccgcggcaggcattctgaaccgtagcggtaccgtctacggcaaggacggcctgacggcg
acgacccagggcggactggatagcactgccggatcgatgcagaccgccggcgatctctct
ctcacggcgggtggcgcgctcacgaacgctcgaggggtaatgtccgcgaacgggctgcat
gggacgatgctcatcgcggctgcaaacatcgacaacacgtccggcacgctcaccgatgcg
ggcgacggcgcaatggcgatcacggcggcagccggtgtcacgaacaccggaggcacgatg
ggcggcaacggtgacgtgaccattgccgcgcggagcttcaccaatacgtcgggtgcgaaa
ctcgtggcggcaggcgcagcgaatctcgatgtcacggagagcgtcaacaatgcgggcggc
acgatatacggcggcaccgcgctgaacctgaatcaggccggtgcgaagctcacgaacgac
ggcggtacgttggagggcggggccgacgtgtcggcgcgggtttcgtcgctctcgaacgca
ggcggcgctatccgagcaaaccgcgacatcgccgccagcggcgcggtgagcggcgtcggg
gaggtgacgtcgggacgcaatctgactttgagcgccaccggcaattacacgaacgacgcg
gcgaatcggctgcatgcggacggagatatgtcggtgtccgcgaccgggacgttgacgaat
gcaggcacgctagccgccgcgggctcgttgacggcgtcgggcggccaggtcgtcaatgca
gcgggggcgcgcatgacatcctcggcgacgacggtgaacgcatcgggcgttctggccaac
gccggccgcatcgaaggcgacgccgtgaggacgaacagcgccgcgctgatgaacacgggc
actgtcatcggcaacgacgtgcaggtgaatgcggccgatatccagaacagcggtgcggca
gcggttatcgctggcgcacagagcgtaaagctgtatgcgtcgaactccgtttcgaacatg
gacggggcgctgatctatagcgctggcgaccttgagatagcgcaagacggcacgcgcgat
agcaccggaatgcttgcgcatcagacgggcaccctcgagaacagctcggcggacattgag
gcggacggcaacctcgatatcgcggcacacacaatcgtcaacaagcgaacgacgatcgtg
acggaaccgggcgcgccgcaaacagcaacgtctgagtggtcgatttggaccgcaggtctg
gaaatcggcgacgatacgaaacaccgtaatagcatcacctttccccaatggagatggagc
ggcgaggcagatcccctttcggggaatatggcgggcgcactacgcacgccggtgtccgtg
actctacccaaatcgcaagtggtgaatgtcgacactggcgcgcagacattctccctgacg
cagccgattacggagacgcgttttcccgacctcaccgcctgcgtgtccaactgcaatacg
aacgtagacatgcttcatagtcaagtcgctacgaatcctacgcagtggtaccaaaacatc
caggataacggcgatacctacaccatcaccttttggccggattggaacccaaatacgcag
attcgtcccgaccaagttcgcgttcggaccgatctgggctctgactcgcatgactacgtc
gaaaagcggcgcgtaacgacgatcacgacgacgactgatcgactagtgagtgcatccgat
gcggcgaagattcgcgctcggggcgagattcgcatcaacgccgacggtggctcgatcacc
aatcaatcctctatcatggctgccggtggcgatcttgttcggcgcgcgacgaacggcagt
gttcgcgatgtcggcatagtattgcagcagactgtgaccgagcaggacacgtcgacgttc
tactggcatcagaagaccggtaatagcgaggacacgaaaacagtcatctatccggtgaca
ccggtggcctccacaaccgttgccgcactaccggctatcgcgaccgcgaaccaagccgtg
cagacggatgcggccaccatcacggtatcgagcgtcaatcgagtcggccaaacggtgacc
ggctcgggcgtgaccggcggcgacgcgacaggaaccttgttgggcggcgtgaccggccag
acgaccgaagttcgcgcgactacgggcgtcatgggacaaagagcgcgagtgaacgtggcc
gatggcgccactggcggagcgagccgaccgcagacgctcggaagtgcatcgagcggaatt
ccgaatctgacattgccggtcaacggcctattcgcggtgcaaacggccccgagcgcgacc
tacctgatcgcaaccgatcctcgtttcacgagctataacaacttcatatcgagcgactac
atgctgagtgcgctcaacctgaatccgcagactacacagaagcggcttggcgatggcttc
tacgaagagaaagtgattcgcgatcaagtcacgcaactcacggggcgtacgttcctcgcc
ggctactcggacaatcttgccgaatacaccgcgctgatgaacagcggcgttacctacgcc
aaacaatttggcctcacgcccggcgtagcgctctcggatacgcagatgaagcagctcacg
accgatatggtctggctggtctcgcaggacgtgacgctgcctgatggcacgcagcaatct
gtgctcgtgccgaagctttatctcgcgcaggccgacaccgtcgatctgcagcatagtggc
gcgttggtggcgggcaagtccgtcagccttgacgccaccggcgacgttgccaaccgcggc
catatcgttggcgatgttgcgacgacggtgctcggcaacaatatcgtcaatcgtggcgtg
attgggagcggcgggacgacgaccgtcgcggcggtacaggatgtccgaaacgtaagtggc
cggataggtggcgccgatacgatggtgcgggccgggcgcgacatcgtcaacgagagcgaa
acattcggtgtcacgcagaccttgcgcgacgggaacctggtttccacggcaacgtcgcaa
ggtacgctggctaccggcacgatttccgcgtcgcgcgacgccgcactgatcgccgggcgc
gacgtgactctcgcaggcgcatcgatccagacgggcggcaatgcaatgctcgcggcaggg
cgcgatatcgacgtgggcaccgtcacgctcgcggccacgcaggaggtgcacacggatgac
gggctgagcggcggccatgacaatctgacgaaaaacgtcgggagttcgattgtgacgggc
ggtagtctgacggcgatttcgggccgcgacacgaccgttaccggctcgacggtgcaagcg
gccggcgatgcgtcgatgatcgcgggcaacgacctgacggtgacggccgcgaaggacatc
cagacgcatgacgagcgatcgctgggtggccgcctgacccagcatacggcgtcgtcatat
gacgaaacggcacgcgcaagcgatatcaatgcgtcgggcaccgtactgctcggcgcgggg
caggcagggaccgctgcaacgttgcttgcgctggagggggtgagtgcggcagcttcgccc
agtagtggcgggaacatgaaggtattgggctcgagtgtgaccaccggcacgacggctacg
gatggcagcgtcaacgggggcgccgtcaagctggtcgcgactggcgacgtcacggtgggc
gcggttaccgagacgcatgactcgcagagctggacgcacgatagccactccggcttcctg
tcgagcagcacgatgacggacgagaagagttcgcatcagatcgtgtcggcgggctcgacc
gtctcgggcgatgtcgttgctgccagtgcggggcatgatttgatcgttgcggggtcgacc
attgcgtcgacgcacgacttgtcgctttcggcggtgcatgacctcaacatcgtgacgacg
caggatacgagccaaagcagccacttccacgaggagacgagctcgggtctcggagcaggc
ggaggagcagggatttcgtacggcaacacggatagcaaagacacggtacatgacaatgcc
attacgcagaatggcagcattgtcggcagcacgggtgggagcgtaacgctcgtcgcgggc
aataacctgcatgtcactggcagcaccgcgatcgcggcgcaggatgtgctcggtcaggct
gccaacgtaaccatcgactcggcgacgagcaccaaccaccacgacgaaacgcacgagacg
aagacgagcggctttacgctcgggctatcgggcagcatcggcaacgccatcatgacggcg
gcgtccgagtctcgtgcagcttccaatagtaaagacgggcgggcgtcggcactgcattcg
attgcggcggcgggggccatcggaaatgccggcgcagcaatggctttgaatccagggaag
acgcccgacatcggtgtgcagttgagtttcggcacgagcgaatcgaaaagcacgtcgaag
gaagatcagacgacgcagaccggtagcgcgatcgacgcaggcgggaccgtggctttcgtt
gcgaccggagacggtacgcaaggaagtggcaacgtgacggtggccggttcggacatcaaa
gcgaccgacgtgctgctggatgcgaagaaccaggtcaatatcgtcaatacgacgaacacg
gacgctactcgcagttccaacagttcgagcagtgcgagtgtgggcgtgtcctattcgttc
gggagcggattcggcatctcggcatcgatgtcgaatgcgcatggcgatgcaaactccgat
gccgtgatgcagaacaactcgcacgtgtccgcttctaatagcgtcgctgttcggtctggc
ggcgatacgaacatcgtcggttcggacgttgctgggcgactggtaaaggttgacgttggt
ggagatctgaacgttgccagcgttcaggacacgaccgtgagcgcggcgcatcaatcgagc
tcgggcgggggcttctcgatcagccagtatggcggcgccagcgcgagcttcagcgcacag
cgcggcaacgcggctggcaattatgcagcggtggtcgaacaggccgggatcaaggctggc
gacggcgggtacgctatcgacgtaaagggcaataccgatctcaagggggcctacgtcgcg
agcgatgccgatgcgtccaagaattcgctgacgacgggctcgctcagtttctcggatatc
gaaaatcactcgcactacagtgccaatagtgcaggtgtgactgtcggcggtgctggcatg
ggtatcgtgccgatgattccccagttcgcgaatggggacgaaaatgcactgacgaagagt
gccgtgagtgccggcgcgattacgcttacggacgcggcgagtcagaagcagaatctgggc
gcgctcgatcgcgatacgtccgatctcaacggcacggtatcgaagttgcccgatatcaac
gatatgctttcgcagcagtcggacctgatgaatgccgcaaatgcggcgggtgcgcaggtg
gcgcaggcgatcggcacgtatagcgactacaagaaggctcgggcggaggacggcgcgaag
gcagcttcattgcttggagaggctgaccttgcggagcagtataaggacgaagccaaacca
tgggcagaaggcggggctgaccgcatcgggctacatatcctgggcggagcgatgttgggg
ggacttggggcgggtggcgccgcgggtgcgtttggtggggctgcaggagctggcgtgtcg
gcagggttggcacctaagctgaacgagatggccgatgacttcggtgcgccggggacgttg
gggcacgcgctcggcaatgggcttgggaatttgatcgcagcggccgcgggggcagcggtt
ggtggaggtgcgggcgcggctactgcgtcgttggctgatctttacaatcggcagttgcat
cctgacgaacggcggtgggccaaagacaacgccggcaggtttgcgcagttctacaaggac
aagacaggccaagacatcaccgacgaccaagcccagcagatgctgctggcgaacggctat
cggcttgttgacgcggcggccagcaaggggccgggcggtgatgcgaccgccgttgcttat
atcagtcaaaacagcaacggcttgttccgggccacgacggccgaatacaacagcccgttc
ctccatggcaacaaggacggctcgttgacacccgagcagcggtcgttgccggggcacgag
gcgaatccccaatttggcatggcagcgggcgcagcggttggattgttcacgctcggggcg
gtggcgccaactgcggcgacggcctgggcgctgggtgcgacgtatgattatgcaggcgac
gtgatcagccacgcgatggggctctcgaacgacgggccgaatgttgggaagtcgctggcg
gtcggcggtgtgaccggagcagcggcacctttctttctgccattaaacacgctgggtaac
gcaacaggcggaaaagtggcggttggcgtctataacgcattgtggggcggcgtcggcgca
tttggagcgacggcaatgacgaatccgggtagtagcgcggatctgtcggcggggattggc
acagcaagcagtttgtttggcgcgggcgtagaggcaaaaatgccaggaccaattggaatg
agcatcaatcaacttctgcaagtgctatctgggccaactcaagccgcaatcgaagccgac
aagcagaagatctctggaaagtaa
DBGET
integrated database retrieval system
