KEGG   Trinickia caryophylli: U0034_08890
Entry
U0034_08890       CDS       T09722                                 
Name
(GenBank) H-NS histone family protein
  KO
K03746  DNA-binding protein H-NS
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tcar03036]
    U0034_08890
   03400 DNA repair and recombination proteins [BR:tcar03400]
    U0034_08890
Chromosome and associated proteins [BR:tcar03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    U0034_08890
DNA repair and recombination proteins [BR:tcar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      U0034_08890
SSDB
Motif
Pfam: Histone_HNS Histone_HNS_N Topoisom_I_N DUF7307 Ocnus
Other DBs
NCBI-ProteinID: WQE13460
LinkDB
Position
1:complement(1971312..1971611)
AA seq 99 aa
MSSYKELLAQREKLEKQIEEAKAREYAEVLNEIKQKMADYGITLAELGGGRGKNGKAGRP
RAGVAPKYRDPVSGSTWSGRGKPPRWIAGQDRDQFLIQK
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcttcttacaaggaacttctcgcacaacgcgaaaagctggagaagcagattgaagag
gcgaaggcgcgtgaatacgccgaagtgctgaacgagatcaagcagaaaatggctgactac
ggcattacgctcgccgaactcggcggtggccgtggcaagaacggcaaagcgggtcgcccc
cgcgccggtgtcgcccccaaataccgggatcctgtgagcggcagcacgtggtcgggccgt
ggcaagccgccgcgttggattgccggccaagaccgcgatcaatttctgattcagaagtaa

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