Trinickia caryophylli: U0034_08905
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Entry
U0034_08905 CDS
T09722
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
tcar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_08905
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_08905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_08905
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
U0034_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
DUF5666
Motif
Other DBs
NCBI-ProteinID:
WQE13463
LinkDB
All DBs
Position
1:complement(1974206..1975351)
Genome browser
AA seq
381 aa
AA seq
DB search
MKSKMQKVLPISAAAMLFATLATGAAADQTVKIGHVAPLTGQIAHLGKDNENGARLAVEE
INAKGLTIGGQKITLQLDAQDDAADPRQATQVAQKLVDDKVVAVVGHLNSGTSIPASKIY
SDAGIVQISPSATNPQYTLQGFKTTYRVVATDAQQGPALANYAASLKIKKVAVVDDATAY
GQGLANEFEKKAKALGLQVLSHDATNDKATDFRAILTKIKGENPDVIMYGGMDATGGPFA
KQAKQLGLRAKVLAGDGVCTDQLATLAGDAAANVVCSEAGRSLEKMGKEGEEFQAKFKKR
FGVPIQIYAPFTYDAVYIIVDAMKRAGSVDSAKILAAMPATNYKGVIGTTQFDEHGDLKH
GVISLYYYKDGKKTLMNEVSM
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaagatgcaaaaggtgttgccgatcagcgcggcggctatgttgttcgccacg
ctggcaacgggcgctgcggctgaccagaccgtcaagatcggtcacgtcgctccgctgacg
gggcagatcgcgcacctgggcaaggacaatgaaaatggcgcgcgccttgccgtagaagaa
atcaatgcaaagggcctcacgatcggcggccagaagatcacgctccagctcgacgcgcaa
gacgacgcggccgacccgcgtcaagccacgcaggttgcccagaagctcgtcgacgacaag
gtcgttgcggtcgtgggccacctgaactcgggtacgtcgattccggcctcgaagatctac
agcgatgcgggcatcgtccagatctcgccgtcggccacgaacccgcagtacacgctgcag
ggcttcaagaccacgtaccgcgtggtggccaccgacgcgcagcaaggtccggcactggcg
aactacgccgcgagcctgaagatcaagaaggtggcggtcgtcgacgacgccacggcttac
ggccagggtctcgccaacgaattcgagaagaaggcgaaggcgctgggtctgcaagtgctc
tcgcacgacgcgacgaacgacaaggcgaccgacttccgcgccattctgacgaagatcaag
ggcgagaaccccgacgtcatcatgtacggcggcatggacgccaccggcggcccgttcgcc
aagcaggcgaagcaactcggcctgcgcgcgaaggtgctcgcgggtgacggcgtgtgtacc
gaccagctcgcgacgctggctggcgacgcggcagccaacgtggtctgctcggaagcgggt
cgttcgctcgagaagatgggcaaggaaggcgaggagttccaggccaagttcaagaagcgt
ttcggcgtgccgatccagatttacgcaccgttcacctatgacgccgtctacatcatcgtc
gatgcgatgaagcgtgcgggctcggtcgattcggccaagatcctcgctgcgatgccggcg
acgaactacaagggcgtgatcggcactacgcagttcgacgagcacggcgacctgaagcac
ggcgtgatctcgctgtactactacaaggacggcaagaagacgctgatgaacgaagtcagc
atgtaa
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