KEGG   Trinickia caryophylli: U0034_09170
Entry
U0034_09170       CDS       T09722                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_09170 (tssF)
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_09170 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WQE13509
LinkDB
Position
1:2028949..2030769
AA seq 606 aa
MTDHLLPEYERELAILRRSMAEFAKRHPKAAARLAIAGEHSEDPHVERLLQSAAFLYARA
STRINDDYPEFTTALLELVYPEYLRPFPSCSIAHFAGTDTVAKLASPAVIERGAELKTRT
GEYTFRTAYDVVFSPLRITEARYTLPSSAPAKARLRERTTGILSITLALPAATTAIPPRA
RVFIDGNRRTVAATLDTLLLRATSAQVEADSTGQWLALDAVPFSPAGFRDDEALIERNAS
AQSQFRLLLEYFAFPEKFDFVDIDIAALLKITGPCRQVTIHLPIEDLPYDSSPARALATL
SAANFRLHCTPVINLFECPAEPVLLKEVDTAVYPVVPQTLLTSDASVYWIDEVRLKERDT
KEANITTIQPYYSLPHLGTQQAIYWHAERGGRLAELVSGRDMLLTLVDERGSTVEVDAHQ
IEADLRCTNGNFPAALETGDPRGDFAYAQSAISGRIAMLCSPTTSTVRPHKPRQMWDMIG
MMPANATALMENGLPTFKALLELHLPAHTSGAQRHIDGIAGLACELALEWLPMEPQPMLA
RGIRVRVSIDDAALEDCAISTLAHAFESVLRVYAPTNSFVQVSLTSAHTGATLMLGEPLP
GKTPLI
NT seq 1821 nt   +upstreamnt  +downstreamnt
gtgaccgaccacctactccccgaatacgaacgcgagcttgcgatactgcgccgttcgatg
gccgaattcgcgaaacgtcacccgaaagctgcggcccggctggccatcgcgggcgagcat
tccgaagacccgcacgtcgagcggttactgcaatccgccgcgttcctctacgcacgcgcg
agcacccgcatcaacgacgattaccccgaattcaccacggcgctgctcgagctggtgtat
ccggaatacctgcgccccttcccctcctgctcgatcgcgcatttcgccggaacggatacg
gttgccaagctggcgagccccgccgtcatcgaacgcggcgccgaactgaaaacgcgtacc
ggcgagtacacgttccgcaccgcttacgacgtcgtattctccccactgcggatcaccgag
gcgcgttatacgttgccctcttccgcgcccgccaaagcccgattgcgcgagcgcacgacg
ggcattctctcgattacgctcgcgctgccggcagcaaccaccgccatcccgccacgcgcc
cgcgtattcatcgacggtaaccgtcgcacggtagcggcaaccctcgacacgctccttctg
cgcgcaacgagcgcacaggtcgaggccgacagcaccggccagtggctcgcattggacgcg
gtgcccttctcgccagcaggctttcgcgacgacgaagccctgatcgagcggaacgcctcc
gcccaatctcaattccgcttgctgctcgagtatttcgctttccccgaaaaattcgatttc
gtcgacatcgatatcgccgcgctcctgaaaatcacaggcccgtgccggcaggtaaccatt
cacttgccaatcgaggacttgccttatgactcctcgcctgcgcgcgccctcgctacgcta
agcgccgcgaatttcaggctccattgcacgcccgttatcaatctgttcgagtgcccggcc
gaaccggtattgctgaaggaagtcgacacggctgtctatccggtcgtgccgcagacattg
ctcacgtccgatgcctcggtctactggatcgacgaagtgcggctcaaggaacgggatacc
aaagaagccaatatcacgacaatccaaccttactactcgcttcctcatctcgggacgcaa
caggccatctattggcacgccgagcgcggcggtcggcttgccgaactggtatcggggcgt
gacatgctgctcacgctcgtcgacgagcgcggttccaccgtggaagtggatgcccatcag
atcgaagcggacctgcggtgcacgaacggcaacttcccggcggcgttggaaacgggcgat
ccgcgcggcgatttcgcttatgcccaaagcgccatctccggccgcatagcgatgctatgc
tcccccacgacaagcacggtccggccgcacaaacccaggcagatgtgggacatgatcggc
atgatgccggcgaacgcgacggccttgatggaaaacggcttgcccaccttcaaggcgtta
ctcgaactgcacctgcccgcacacacgtcgggtgcgcagcggcatatcgacggaatcgcc
ggcctggcctgcgaactggcgctcgaatggttgccgatggagccgcagccgatgttggcg
cgcgggattcgcgtgcgcgtgtcgatcgacgatgccgcgctcgaggactgcgcgatcagc
acgctcgcccacgcgttcgaaagcgttctccgcgtttatgcaccgacgaacagcttcgtg
caggtatcgctgacgtccgcgcacacaggcgccacgctgatgctgggcgaaccgctgccc
ggcaagacgccactgatctaa

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