Trinickia caryophylli: U0034_09750
Help
Entry
U0034_09750 CDS
T09722
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcar03032
]
U0034_09750 (gyrB)
03400 DNA repair and recombination proteins [BR:
tcar03400
]
U0034_09750 (gyrB)
Enzymes [BR:
tcar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
U0034_09750 (gyrB)
DNA replication proteins [BR:
tcar03032
]
Prokaryotic type
DNA Topoisomerases
U0034_09750 (gyrB)
DNA repair and recombination proteins [BR:
tcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U0034_09750 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WQE10110
LinkDB
All DBs
Position
1:complement(2172604..2175075)
Genome browser
AA seq
823 aa
AA seq
DB search
MSEQHNTQPDNSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCNEIQVIIHADNSISVTDNGRGIPTGIKRDDKHEPKRSAAEIVMTELHAGGKFDQNS
YKVSGGLHGVGVSCVNALSKWLRLTVRRDGKKYFMEFHRGVVQNRVIEEADGEQVSPMQY
LGETEKRGTEVHFMADETIFGNVEYHYDILSKRIRELSFLNNGVRIRLTDQRSGKEDDYA
LAGGVKGFVEFINRTKTVLHPTIFHVNAEKEGVGVEVAMQWNDSYNESVLCFTNNIPQRD
GGTHLTGLRAAMTRVINKYIGDHEIAKKAKVETSGDDMREGLSCVLSVKVPEPKFSSQTK
DKLVSSEVRAPVEEIVAKALEEFLLETPNDAKIICSKIVDAARARDAARKAREMTRRKGV
LDGVGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAR
YDKLLSSEQIVTLITALGCGIGKEDYNIEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQ
MPEMIERGYIYIAQPPLYKVKAGKDERYLKDGAELNAHMLRLALQGSELMPSEGAAPIAG
DALGELARSYLLAQGVVERLSRLYDASSLEAVMDGVAIDLSSEAGAAATAQALETALRSD
PLKPEVSVYPQYDAARELRSLRVERRHHGNVKVSVIDEEFLLTADYQQLLNTANTFKGLI
GAGAVIKRGERSMAVGDFKSAMRWLIADAERNVSKQRYKGLGEMNPEQLWETTMDPTVRR
LLRVQIEDAIAADGIFTTLMGDEVEPRRAFIESNALRAGNIDV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacagcacaacacgcagcccgacaacagctatggcgcctcgtctattcagatc
ctcgagggtctggaggcggtgcgcaagcggcccgggatgtacatcggcgacacgtcggac
ggcaccggtctgcatcacctcgtattcgaagtgctcgacaattccatcgacgaggcattg
gctggctattgcaacgagattcaggtcatcattcacgccgacaattccatatcggtaacg
gataacggccgcggcattccgaccggcatcaagcgcgacgacaaacacgagccgaagcgc
agcgcggccgagatcgtgatgaccgagctgcacgcgggcggcaagttcgatcagaacagc
tacaaggtgtcgggcggtttgcacggcgtgggcgtgtcgtgcgtgaacgcgctttcgaag
tggttgcgcctgacggtgcggcgcgacggcaagaagtatttcatggagtttcatcgcggc
gtggtgcaaaaccgcgtgatcgaggaagcggacggcgagcaggtctcgccgatgcagtac
ctcggcgaaacggaaaagcgcggcaccgaagtgcacttcatggccgacgaaacgattttc
ggcaatgtcgagtatcactacgacattttgtcgaagcgcattcgcgagctgtcgttcctg
aataatggcgtgcgcatccgcctgaccgaccagcgttcgggcaaggaagacgattacgcg
cttgcgggcggcgtgaagggtttcgtcgaattcatcaaccggacgaagaccgtgctgcat
ccgacgattttccacgtcaatgccgagaaagagggcgtgggcgtggaagtggcgatgcag
tggaacgacagctacaacgagagcgtgctctgcttcacgaacaacattccgcagcgcgac
ggcggcacgcacttgaccggcttgcgcgcggcgatgacgcgcgtcatcaacaagtacatt
ggtgatcacgagatcgcgaagaaggcgaaggtggagacgtcgggcgacgacatgcgcgaa
gggttgtcgtgcgtgctgtcggtgaaggtgcccgagccgaagttcagttcgcagacgaag
gacaagctcgtttcgtcggaagtgcgggcgccggtggaggaaatcgtggcgaaggcactc
gaggagtttttgctcgagacgccgaacgacgcgaagatcatctgcagcaagatcgtggat
gcggcgcgcgcgcgcgacgcggcccgcaaggcgcgcgagatgacgcggcgcaagggtgtg
ctcgacggcgtgggcctgccgggcaagctggccgattgccaggagaaggatccggcgaag
tccgagatctatatcgtggagggcgactcggcgggcggctcggcgaagcaggggcgcgac
cgtaagttccaggcgatcttgccgctgcgcggcaaggtactgaatgtggagaaggcacgc
tacgacaagctgctttcttccgagcagatcgtgacgttgattacggcgcttggctgcggt
atcggcaaggaagattacaacatcgagaagctgcgttatcaccgcatcatcatcatgacc
gatgcggacgtggacggcgcgcacattcgtacgctgctgttgacgtttttctatcggcag
atgccggagatgatcgagcgcgggtacatctacattgcgcagccgccgctttacaaggtg
aaggcgggcaaggacgagcgttatctgaaggatggcgccgagctcaatgcgcatatgctg
cggcttgcgttgcagggctccgagttgatgccgagcgaaggggcggcgccgatcgccggt
gatgcgcttggtgagctggcgcgttcgtatctgctcgcgcagggggtggtggagcggctc
agccggctttacgacgcgagctcgctcgaggcggtgatggatggcgtggcgatcgatctg
tcgagcgaggctggggcggcggccacggcgcaggcgctggagacggcgctgcgcagcgat
ccgttgaagcctgaagtgtcggtgtatccgcagtacgacgcggcgcgcgagctgcggtcg
ctgcgtgtggagcggcgccatcatggcaacgtgaaggtgtccgtgatcgacgaggagttt
ttgctcaccgccgattatcagcagctgctcaataccgccaatacgttcaaggggttgatc
ggggccggtgccgtgatcaagcgcggggagcgcagcatggccgtgggcgacttcaagtcc
gcgatgcggtggctcattgccgatgccgagcgcaatgtctcgaagcagcggtataagggg
ctcggcgagatgaacccggagcaactctgggaaacgacgatggacccgaccgtgcggcgg
ttgctgcgcgtgcagatcgaggacgcgattgcggccgatgggatctttaccacgctcatg
ggcgatgaggtcgagccgcggcgggcgtttatcgagtcgaatgcgttgcgggcggggaat
attgatgtttga
DBGET
integrated database retrieval system
