Trinickia caryophylli: U0034_09780
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Entry
U0034_09780 CDS
T09722
Symbol
yidC
Name
(GenBank) membrane protein insertase YidC
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
tcar
Trinickia caryophylli
Pathway
tcar02024
Quorum sensing
tcar03060
Protein export
tcar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
U0034_09780 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
U0034_09780 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_09780 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tcar03029
]
U0034_09780 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tcar02044
]
U0034_09780 (yidC)
Mitochondrial biogenesis [BR:
tcar03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
U0034_09780 (yidC)
Secretion system [BR:
tcar02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
U0034_09780 (yidC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
Motif
Other DBs
NCBI-ProteinID:
WQE10114
LinkDB
All DBs
Position
1:2179484..2181148
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AA seq
554 aa
AA seq
DB search
MDIKRTVLWAIFFVSAIMLFDNWQREHGRPSMFFPNPEATRPAAGTAPGSSASASQAGAS
AAPSAAASAPGAAGGQPQAAAQLIDFSTDVYKGQIDTRGGTLEKLTLTRNSDPKQADLNV
TLFDRTANHTYLARTGLVGGDFPNHNDVFTVVQGPRSLSGDAKSFQISLESPVKGGVKVV
KTYTFTRDSYVIGVDTKIQNVGTAPVTPSVYMELVRDSEPVETPRFSHTFIGPAVYTNEH
HFQKISFSDIDKKKEEYAPSADNGWIAMVQHYFATAWIPQQGVKRDIYVEKIDPTLYRVG
MREPLASIAPGQTVDVSARLFAGPEEERVLEGIAPGLDLVKDYGWVTIIAKPLFWLLEKI
NGVVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKGDPQKMNAA
LMELYKTEKVNPFGGCLPIVIQIPVFISLYWVLLSSVEMRGAPWVLWIHDLSQQDPYYIL
PVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPSGLVLYYVVNNVLSIAQQ
YYITRMMGAQKKAA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaacgcaccgtcctatgggcgatcttcttcgtgtcagcgatcatgctgttc
gacaactggcagcgcgagcacggtcgcccgtcgatgttcttcccgaacccggaggccacg
cgcccggccgcgggcaccgcgcccggttcgtcggcgtcggcatcgcaggccggcgcgagc
gcggcgccctcggcggccgcctcggcaccgggcgcagcgggcgggcagccgcaggcagca
gcccaactgatcgacttcagcacggacgtctataaaggccagatcgacacgcgcggcggc
acgctcgagaagctcacgctcacgcgcaacagcgatccgaagcaggccgacctcaacgtc
acgctcttcgaccgcaccgcgaatcacacgtatctcgcgcgcacgggcctcgtaggcggc
gacttcccgaaccacaacgacgtcttcaccgtcgtgcagggcccgcgttcgctttcgggc
gacgcgaagtcgtttcaaatcagcctcgaatcgcccgtcaagggcggcgtaaaggtcgtc
aagacctacacgttcacgcgcgacagctatgtgatcggtgtcgatacgaagattcaaaac
gtgggcacggcccccgtcacgccgagcgtctacatggaactcgtgcgcgacagcgagccc
gtggaaacgccgcgtttctcgcacacgttcatcggcccggctgtctatacgaacgagcat
cacttccagaagatctcgttcagcgacatcgacaagaagaaggaagagtacgcaccgagc
gcggataacggctggatcgcaatggtgcagcactacttcgcgacggcctggattccgcag
caaggcgtgaagcgcgacatctacgtcgagaagatcgacccgacgctctaccgtgtcggc
atgcgcgagccgcttgcatcgattgcgccggggcagaccgtggacgtttccgcccggctt
ttcgccggccccgaagaggaacgcgtgctcgagggcatcgcgccgggcctggacctcgtg
aaagactacggatgggtgacgatcatcgcgaagccgcttttctggctgctcgagaagatc
aacggcgtggtcggcaactggggttgggcgatcgtgctgctcacgctgctcatcaaggcc
gtgttcttcccgctgtcggcagcgagctacaagtcgatggcgcgcatgaaggaaatcacg
ccgcgcatgcaggcgctgcgcgagcgcttcaagggcgatccgcagaagatgaacgcggca
ctgatggagctctacaagaccgagaaggtgaacccgttcggcggctgtctgccgatcgtg
attcagattccggtgttcatttcgctgtactgggtgctgctctcgtcggtggaaatgcgc
ggcgcgccgtgggtgctctggattcacgacctgtcgcagcaggacccgtactacatcctg
cccgtgctgatggccgtgtcgatgttcgtgcagaccaagctgaaccccacgccgcccgat
cccgtgcaggcgaagatgatgatgttcatgccgatcgccttctcggtcatgttcttcttc
ttcccctcgggcctggtgctctactacgtcgtgaacaacgtgctgtccatcgcgcagcag
tactacatcacgcgcatgatgggcgcacagaagaaagcggcctga
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