Trinickia caryophylli: U0034_09970
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Entry
U0034_09970 CDS
T09722
Name
(GenBank) branched-chain amino acid ABC transporter ATP-binding protein/permease
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
tcar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_09970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_09970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_09970
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
U0034_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
SMC_N
AAA_30
AAA_29
AAA_23
RsgA_GTPase
AAA_22
AAA_27
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
WQE10151
LinkDB
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Position
1:complement(2228160..2229947)
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AA seq
595 aa
AA seq
DB search
MKRFFSVVTPFRLFLVVIFLLPVLPGALRVPEYWITLANYIGLYSIVAIGLVLLTGIGGM
TSFGQAAFVGVGAYASAYLTTQFAVSPWLALLVGIALTVVVALVIGAVTMRLSGHFLPLG
TIAWGLSLYYLFGNVDWLGKYDGINGIPPLSVFGFALASGRSVYYLIWLVVLLAVLSVQN
LLDSRPGRAIRALRGAGVMAEAMGVHTAWLRVVIFVYSAVLAAISGFLYAHLQRAVNPTP
FGLNHGIEYLFMAVVGGVSHVWGAILGAAVLTVVQDYLQTLLPALLGQSGNFETIVFGIV
MVVLLQYAREGVWPFVARLFPRGPAAQVPETAENLPHRTKARAGAPLLAVERARKAFGGL
VAVNDVSFSVEAGEIVALIGPNGAGKSTTFNLVTGVLQLTGGAIHFAGERIDRLGSREIA
RRGIARTFQHVKLLPGMTVLENVALGAHLRGHAGVWRSIARLNRSEENRLMAEAARQIRR
VGLEPHLYEEAGSLALGQQRVLEIARALAGDPALLLLDEPAAGLRYLETQRLAELLRKLK
AEGMSVLLVEHDMDFVMNLADRVVVMEFGTRIAHGLPEEVQKDPAVLEAYLGGVD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgctttttctccgtcgtcacgccgttccggcttttcctcgtcgtcatcttcctg
ctgccggtgctgccaggcgcgctgcgcgtgcccgaatactggatcacccttgcgaactac
atcggcctttattcgatcgtcgcaatcgggctcgtgctgctgacgggtatcggcggcatg
acgagcttcggccaggctgcgtttgtcggcgtaggggcctatgcgagtgcctatctgacg
acgcaattcgcagtctcgccgtggctcgcgcttctcgtcggcatcgcgctcacggtcgtg
gtcgcgctcgtgatcggtgccgtcacgatgcgcttgtcggggcatttcctgccgctcggc
acgatcgcctgggggctgtctctttactacctgttcggcaatgtcgactggctcgggaaa
tacgacggcatcaacggtattccaccgttgtccgtgttcggcttcgcgctcgcttcggga
cgcagcgtctactatctgatctggctcgtcgtgctcttggccgtgctctcggttcagaac
cttctcgacagccggcctgggcgtgccattcgcgcgctgcgcggcgccggtgtcatggcc
gaggcgatgggtgttcatacggcgtggctgcgcgtcgtcatcttcgtctattcggccgtg
ctcgcggccatttcgggctttctctacgcccatctgcagcgggccgtgaacccgacgcca
ttcggcctcaatcacggcatcgagtatttgttcatggcggtcgtgggcggtgtctcgcac
gtgtggggcgcgattctgggtgcggctgttctgaccgtggttcaggattacctccaaacg
ctgttgcccgcgttgctgggccaaagcggcaatttcgagacgatcgtcttcggcatcgtc
atggttgtgctgctgcaatatgcgcgcgagggcgtatggccctttgtggctcggctcttt
ccacgtggtcccgcggcgcaggtgcccgaaacggcggagaatttgccgcatcgcacaaaa
gcgcgggcgggcgcgccgttgctggccgtcgagcgagcgagaaaggccttcggcgggctc
gttgccgtcaacgatgtcagcttcagcgtggaggctggcgagatcgtcgcgttgatcgga
cccaacggggcaggcaaatcgacgacgttcaacctcgtgaccggcgtgctgcagcttacc
ggcggcgcgatccatttcgccggcgaacggatcgaccggctcggctcacgtgaaatcgcc
agacgcgggatcgcccggacgttccagcacgtcaagctgctgcccggaatgacggtgctc
gagaacgtcgcgctcggtgcgcacttgcggggccacgcaggcgtgtggcgcagtatcgcg
cggctcaaccgctcggaagagaatcgcctgatggccgaggccgctcggcagattcgccgt
gtcggcctcgagccccatctctacgaagaggcggggagcctcgcgctgggccagcagcgg
gtgctcgaaatcgcgcgggcgctggccggcgacccggcgctgttgctgctcgacgagccc
gccgcaggcctgcggtacctggagacgcagcggctggcggagttgctgcgcaaactgaaa
gcggagggcatgagcgtgctgctggtcgagcacgacatggatttcgtcatgaacctggca
gaccgcgtcgttgtcatggagttcggcacgcgtatcgcacatggactgcccgaggaggtt
cagaaagatccggccgtactcgaagcttatttgggaggggtggactga
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