Trinickia caryophylli: U0034_10290
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Entry
U0034_10290 CDS
T09722
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_10290
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
U0034_10290
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GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
Fe_dep_repress
HTH_23
HTH_24
MarR_2
Stn1_C
Motif
Other DBs
NCBI-ProteinID:
WQE13681
LinkDB
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Position
1:complement(2299574..2300245)
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AA seq
223 aa
AA seq
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MRQFCAMNPGELACTKEMDELVLGHRHVKKGEALYRVGDTFKNIYAVRTGSFKKLTLLSD
GREQVTGFYLAGEPLGLDGISNGHYASDAIALEDSSVCVMPFELLELLSREVKAVLHHVY
RLLSAEVVRESSLMMLLGTMTADERVASFLLDLSRRWQQRAYSPTQFVLRMTREETGSFL
GIKLETVSRTLSRFQKDGLIEVNGKEVRILDLRRLHEAGHARC
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagttctgtgccatgaaccctggcgagctcgcctgcaccaaggaaatggacgag
ctcgtgctcggccaccggcatgtcaagaaaggcgaagcgctttaccgggtcggcgatacg
ttcaagaacatctatgcggtacggacgggttcgttcaagaagctcacgctgctctccgac
ggccgcgaacaggtgacgggcttctatctggccggcgagccgctcggcctcgacggcatc
tccaacggccactatgcgagcgacgccatcgcgctggaagacagcagcgtgtgcgtcatg
ccgttcgagctgctcgagctgctgagccgcgaagtgaaagccgtgcttcatcatgtctac
cgcctcttgtcggcggaagtcgtgcgcgaaagcagcctcatgatgctgctcggcaccatg
accgccgacgagcgcgtcgcgagcttcctgctcgatctttcgcggcgctggcagcagcgc
gcctactcgcccacgcagttcgtgctgcgcatgacgcgcgaggagacgggcagcttcctc
ggcatcaagctcgaaacggtcagccgcacgctatcgcgcttccagaaggacggcctcatc
gaggtcaacggcaaggaagtgcgcattctcgatctgcgccggctgcacgaagcgggccac
gcccgctgctga
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