Trinickia caryophylli: U0034_10645
Help
Entry
U0034_10645 CDS
T09722
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00550
Peptidoglycan biosynthesis
tcar01100
Metabolic pathways
tcar01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U0034_10645 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0034_10645 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tcar01011
]
U0034_10645 (mrdA)
Enzymes [BR:
tcar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
U0034_10645 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tcar01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
U0034_10645 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WQE10271
LinkDB
All DBs
Position
1:complement(2366930..2369308)
Genome browser
AA seq
792 aa
AA seq
DB search
MTEFKNTQQQLSQFRLRVAATAFFVLVCFGLLIFRFLYLQVWHYSKYSLQANENRISVAP
IVPNRGIITDRNGVVLARNYSAYTLEITPSKLDDTLENTIDKLSSVVKIDALDRRRFKKL
LEDSKHFESLPIRTRLTDEEVARFTAQRFRFPGVEVRARLFRQYPLGATAAHVIGYIGRI
SQRDQERIDAQSEQNDSDPDHYDARLDANNYKGTDYIGKIGVEQSYETELHGLTGFEEVE
VTAGGRPVRTLSRTQATPGNNLVLSIDIGLQQVAEQAFAGRRGALVAIEPQTGDVLAFVS
APSFDPNAFVDGIDQQTWDALNNSPDHPLLNRPLHGAYPPGSTYKPFMALAALALGKRTP
EWGFHDPGSYTFGGHTFRNDVPQGQGWIDMNRAIMVSNDTYFYMLAHDLGVNAIANFMKP
WGFGQITGIDIAGEARGILPSTEWKRKAYRKPEQQRWYEGETISLGIGQGYNAFTMLQLA
HATATLADNGIVMRPHLVKEIENPISHQSRLTVPHESGRIPGVTQSEIDVVKRGMINVTS
NPSGTAYQVFRDSPYLAAGKTGTAQVYSLQGQKYHGSAIAEHLRDHSLFIAFAPAEHPQI
AIALVVENGGWGAAVAGPIARRVMDYYLLQRNKPGVLAAEVAAAASATQAASGPVIGQIN
NTDSRTALPVKVAPGFKALPLPATAVAASAAAASEPAALSASAVPSAASGPAAALQASAA
AAAPEPRKPRAAAAMPASAGENARKRAPAPSGPNDTPAGELGPAPARGERERPSAGAAPA
TPPTPASPGADE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcaagaacactcagcagcaactgtcgcaattccgcttgcgcgtggccgca
acggcctttttcgtgctcgtgtgcttcggcctgctcatcttccgcttcctttacctacag
gtctggcattacagcaagtactcgctgcaggccaacgagaaccgcatctcggtcgcgccg
atcgtgccgaatcgcggcatcatcaccgaccgcaacggggtcgtgctcgcgcgtaactac
tcggcctacacgctcgaaattacgccatcgaagctcgacgacacgctcgagaacaccatc
gacaagctctcgagcgtcgtcaagatcgacgccctcgaccgccgccgcttcaagaagctg
ctcgaagactcgaagcacttcgaaagcctgcccatccgaacccgccttaccgacgaggaa
gtggcccgcttcacggcgcagcgcttccgctttccgggcgtggaggtgcgcgcacgtctc
tttcgccagtacccgctcggcgcgaccgccgcgcacgtgatcggctacatcggccgtatc
tcgcagcgcgatcaggagcgcatcgatgcgcaaagcgagcagaacgacagcgatccggac
cactacgatgcgcgcctcgatgcgaacaactacaagggcaccgactacatcggcaagatc
ggagtcgaacagagctacgaaacggagctgcacggcctgaccgggttcgaggaagtcgag
gtgacggccggcggccggcccgtgcgtacgctctcgcgcacgcaggccacgccgggcaac
aacctcgtactgtccatcgacatcggcctgcagcaggtggcggagcaggcattcgcgggc
cggcgcggcgcgctcgtggcgatcgagccgcaaacaggcgatgtcctcgcgttcgtctcc
gcgccgagcttcgacccgaatgcgttcgtcgacggcatcgatcagcagacgtgggacgcg
ctcaacaactcgcccgatcacccgctcctgaaccggccgctgcacggcgcctatccgccg
ggctcgacctacaagccgttcatggcgcttgccgcgctcgcgctcggcaagcgcacgccc
gaatggggctttcacgatcccggctcctatacgttcggcggccacacgttccgcaacgac
gtcccgcaggggcagggctggatcgacatgaaccgcgcgatcatggtgtcgaacgacacc
tatttctacatgctcgcgcacgatctcggcgtcaatgcgatcgcgaatttcatgaaaccg
tggggcttcgggcagattacgggcatcgacatcgcgggcgaagcgcgcggcatcctgcct
tcgaccgaatggaagcgcaaggcgtaccgcaagcccgagcagcagcgttggtacgagggc
gagacgatcagcctcggcatcgggcagggctacaacgcgttcacgatgctgcagctcgcg
cacgcaacagccacactcgccgacaacggcatcgtcatgcggccgcacctcgtcaaggag
atcgagaacccgatatcgcatcagtcgcggctcacggtgccgcacgaaagcggccgcata
ccgggagtgacgcagtccgagatcgacgtcgtcaagcgcgggatgatcaacgtgacgagc
aacccgtcgggaaccgcgtatcaggtcttccgcgactcgccctacctggccgccggcaag
accggcacggcgcaggtgtactcgctgcagggccagaagtaccacggcagcgcaatcgcc
gagcatctgcgcgaccattcgctcttcattgccttcgcaccggccgaacatccacagatc
gccattgcgctcgtggtcgaaaacggcggttggggtgcagccgtcgccggtccgatcgcg
cgccgcgtcatggattactacctgctgcaacgcaacaagcccggcgtcctggcggcggaa
gtggccgccgcggcgtccgcaacgcaagcggcgtcggggcccgtcatcggtcagatcaac
aacacggacagccgcaccgcactgccggtcaaggtcgcgccgggcttcaaggcgctgccg
ctgcccgcgacagcggtcgccgcctccgcggctgcggcctcggagccagcggctctttcc
gcctctgctgtgccttcggccgcgtcagggccagccgccgccctgcaagccagcgcagcg
gccgcggcgcccgaaccgcgcaagccgcgcgcggctgccgccatgccggcatcggccggg
gagaacgcgcgcaagcgcgcgcccgcgccgtctgggccgaacgatacgccagccggcgag
ctgggccccgcacccgcgcgcggcgaacgcgaacgccccagcgcgggtgccgcgccggct
accccgcccacgccggcctcgcccggcgcggacgaataa
DBGET
integrated database retrieval system
