Trinickia caryophylli: U0034_10970
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Entry
U0034_10970 CDS
T09722
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
tcar02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_10970
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
U0034_10970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_10970
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
U0034_10970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF7625
Motif
Other DBs
NCBI-ProteinID:
WQE13688
LinkDB
All DBs
Position
1:2440040..2441635
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AA seq
531 aa
AA seq
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MSILVVTACAAFAWLDAHAAEPPAKTLVYCSDASPAGFDTAQYTTSVENSAAGYTVYDRL
LEFEHGGTRVEPGLAESWDISPDGKRYTFHLRRGVKFQTTAYFTPTREFDADDVMLTFER
MLDPDNALRKAYPVSFPYVVDLGLDKNIAKIEKLDPYTVRFTLKAVDAPFLSELAMPFTS
VLSAEYAEQLMTAGKAADLNRYPVGTGPFVFRGYTKDASIRFDGNRDYWKPGVVRLAKLI
FEITPDAGVREEKLRRNECQVMTYPRPADVAALKADSRLQVPSQVGFNLGYLAYNTTRKP
LDNVDVRRALDMAIDKQAIVEMVYQGAAQVASHPMPPTQWSYDPTVKDAPRDIAQAKRLL
EKAGLKDGFELTLWAMPVQRAYNPNARLMAEMIQADWAKIGVKARIVSYEWGEYVKRARA
GEHDAALLGWTGDNGDPDNWLGVLLGCASVKGGNFAKWCYKPFDDLIVKARETTAPAERA
ALYMRAQRIFAEQRPFTPIAHSVVYQPMRKEVTGFKIDPFGPTQFWNVGLR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcctcgttgtcaccgcatgcgcggcgttcgcctggctcgatgcgcatgcggct
gagcccccggcgaaaacgctcgtgtattgctcggatgcgagcccggccggcttcgatacc
gcgcaatacacgacaagcgtcgaaaattcggctgcgggctacaccgtctatgaccggctg
ctcgaattcgagcatggcggcacgagagtcgagccgggcctcgccgagtcctgggacatt
tcccccgacggcaagcgctatacgtttcatctgcgccgcggcgtgaagtttcagacgacg
gcgtacttcacgcccacacgcgagttcgacgcggatgacgtcatgctgacgttcgagcgc
atgctcgatcccgacaatgcattgcgcaaggcgtatcccgtatcgtttccgtacgtcgtc
gatctcgggctcgacaagaacatcgcgaaaatcgaaaagctcgacccctacacggtccgc
ttcacgttgaaggccgtcgatgcgccctttttgtccgaacttgcgatgccattcacttcg
gtgctgtcggccgaatacgccgaacagttgatgacggcgggcaaggccgccgatctgaac
cgctatccggtcggcaccgggcctttcgttttccgcggctatacgaaggacgcgtcgatc
cgcttcgacggcaatcgcgattattggaagccgggcgtcgtgcgccttgccaagctcatc
ttcgagatcactccggatgcgggcgtacgagaagagaagctgcgccgcaacgagtgccag
gtgatgacctacccgcgcccggccgacgtggcggcgctgaaagccgattcccgcctgcag
gtgccctcgcaggtcggtttcaatctcgggtatctggcgtacaacacgacgagaaagccg
ctcgacaacgtggatgtacggcgtgcgctcgacatggccatcgacaagcaggcgatcgtc
gagatggtctatcagggcgccgcgcaggtggcgagccacccgatgccgcccacgcaatgg
tcctacgatccgacggtgaaggacgcgccgcgcgacatcgcgcaagcgaagcgcctgctg
gagaaggcggggttgaaggacggcttcgagttgacgctgtgggccatgccggttcagcgc
gcgtacaacccgaacgcgcggctcatggccgagatgatccaggccgattgggcgaagatc
ggcgtcaaggcgagaatcgtgagctacgaatggggcgaatacgtgaagcgtgcgcgtgcc
ggtgagcacgacgcggcgctgctcgggtggaccggcgacaacggcgacccggacaactgg
ctcggtgtgctgctcggctgcgcgtccgtgaagggcggcaatttcgccaagtggtgctac
aagcccttcgacgatctgatcgtcaaggcccgcgagacgaccgctccggccgagcgtgcc
gcgctgtatatgcgcgcacaacggattttcgctgaacaacggccgttcacgccgatcgcg
cactcggtcgtctatcagccgatgcgcaaggaggtgaccgggttcaagatcgatccgttt
gggccgacgcagttttggaatgtgggattgcggtag
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