Trinickia caryophylli: U0034_11000
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Entry
U0034_11000 CDS
T09722
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
tcar02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_11000
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
U0034_11000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_11000
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
U0034_11000
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Paralog
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GFIT
Motif
Pfam:
SBP_bac_5
HTH_psq
DUF7625
Motif
Other DBs
NCBI-ProteinID:
WQE10341
LinkDB
All DBs
Position
1:2446754..2448388
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AA seq
544 aa
AA seq
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MMQDSLVRAARATAFAAAALAVSLGAATISQAATIPNKTLVYCSEGSPAGFDPAQYTTSV
DFTANTFTSYNRLVEFARGSTKIEPGLAEKWDVSPDGKTYTFHLRHGVKFQTTSFFKPTR
EFNADDVVFTFERMLDPNQPFRKAYPVSFPYFTDMGLDKLIKKIEKVDPYTVRFVLNDVN
APFLQNMGMEYASILSAEYADQLLKAGKAADINQYPVGTGPFIFRSYTKDSAIRFDGNPD
YWKPNAVKVSKLIFSITTDSSVRAQKIKRNECQIMSYPKPADLATLKSDANVDMASQAGF
NLGYLAYNVQHKPLDNVDVRRALDMAINKKAIVESVYQGAGQAATNPMPPTQWSYDKNLK
AAAYDPAKAKALLAKAGFPNGFEIALWAMPVQRPYNPNAKLMAEMIQSDWAKIGVKAKIV
TYEWGEYIKRGHAGDQDAYLIGWTGDNGDPDNWLGTLLGCEAINGNNFSKWCYKPFDELV
QKGRTTTDQAKRTKYYEEAQKIFADQLPFSPIAHSTVYQPTTKAVVDMKIDPLGYTRFDG
VGMK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagacagcctggtgcgcgccgcgcgagcgaccgctttcgcagccgcagccctg
gcggtgtctctcggcgccgcgacgatctcgcaagccgcgacgattccgaacaagacgctc
gtttactgctccgagggcagccccgccggcttcgatccggctcaatacacgacgagcgtc
gatttcaccgcgaacaccttcacgagctataaccgcctcgtcgaatttgcccgcggcagc
acgaagatcgagccgggcctcgcggaaaagtgggatgtctcgcccgacggcaagacctat
acgttccatctgcggcacggcgtcaaattccagacgacgtccttcttcaagccgacgcgc
gaattcaacgccgacgacgtcgtctttacgttcgagcgcatgctcgatccgaaccagccg
ttccgcaaggcctacccggtgtcgtttccgtacttcaccgacatgggcctcgacaagctg
atcaagaaaatcgagaaggtcgacccctacaccgtccgcttcgtgctcaacgacgtcaac
gcgccgttcctgcagaacatgggcatggaatacgcgtcgattctctctgccgaatacgcc
gatcaattgctgaaagcgggcaaggcagccgacatcaatcaatacccggtcggcacgggc
cccttcatcttccgcagctatacgaaggattccgcgatccgcttcgacggcaaccccgac
tactggaagccgaatgcggtcaaggtttcgaagctcattttctcgatcacgaccgactcg
agcgtgcgcgcgcagaagatcaagcgcaacgaatgccagatcatgagctatccgaagccg
gccgatctcgccacgctcaagagcgatgcgaatgtcgacatggcgtcgcaagcaggcttc
aacctcggctatcttgcttataacgtgcagcacaagccgctcgacaacgtcgatgtgcgg
cgtgcgctcgacatggcgatcaacaagaaggcgatcgtcgagtcggtctatcagggcgcg
ggccaggccgcgacgaacccgatgccgcccacgcagtggtcgtacgacaagaacctgaag
gccgcagcgtacgatccggcgaaggccaaggcgctgcttgccaaggccggctttccgaac
ggcttcgaaatcgcgctctgggccatgccggtgcagcgcccgtacaacccgaacgccaag
ctgatggccgagatgatccagtccgactgggccaagatcggcgtgaaggccaagatcgtc
acgtatgagtggggcgagtacatcaagcgcggccacgcgggcgatcaggacgcctatctg
atcggctggaccggcgacaacggcgaccccgacaactggctcggcacgctgctcggctgc
gaggccatcaacggcaacaacttctcgaagtggtgctacaagccgttcgacgaactcgtc
cagaagggccgcacgacgacggatcaggccaagcgcacgaagtactacgaggaggcccag
aagatcttcgccgatcagctcccgttctcgccgatcgcgcactcgaccgtctatcagccg
acgacgaaggccgtcgtcgacatgaagatcgacccgctcggctatacccgctttgacggt
gtcggcatgaagtga
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