Trinickia caryophylli: U0034_11245
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Entry
U0034_11245 CDS
T09722
Name
(GenBank) GntR family transcriptional regulator
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_11245
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
GntR family
U0034_11245
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GFIT
Motif
Pfam:
GntR
FCD
HTH_Crp_2
HTH_24
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
WQE10387
LinkDB
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Position
1:2496625..2497323
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AA seq
232 aa
AA seq
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MALTTQQAIVQTLRERVLSGELAPGERLVELQLAERLGVSRTPLRLALSVLATEGLLERS
SARGFTVRRFSVRDILNAIDVRGVLEGLAARTLAERGFSAELADRLDALLEEGDRLFAGG
AAALTETNYADLNGRFHALIVEQATNQALSTALLLNDRIPFVSPATVVFDKDAKEKQFQT
LMFAHRQHHSIVAALKAGEGARVEALMKEHTNISKESLNFPGRRLHPVMVES
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccctcacgacgcaacaggcaatcgtccagacactgcgcgaacgcgtgctgagcggc
gaactcgcgccgggcgagcggctcgtcgaattgcagcttgccgagcggctcggcgtttcg
cgcacgccgctgcgcctcgcgttgagcgtgctggccacggaggggctgctcgagcggtct
tcggcgcgcggcttcacggtgcggcggttttcggtcagggacattctcaacgcgatcgac
gtgcgcggcgtgctcgaggggctcgccgcgcgcacgctcgccgagcgtgggttcagcgcc
gagctggccgatcgactcgacgccttgctggaagaaggcgacaggcttttcgccggaggc
gccgcagcgcttaccgaaaccaattatgcggacctgaacggacggtttcacgcacttatc
gtcgagcaggcgacgaaccaggccctcagtaccgcgctgttgctcaacgaccgcattccc
ttcgtttccccggcaacggtggtcttcgacaaggatgcaaaggaaaagcagtttcagacg
ctgatgttcgcccaccgtcagcatcacagcatcgtcgctgcgctcaaggcgggggaggga
gcgcgcgtcgaagcgctgatgaaagagcatacgaacatatcgaaggaaagcctcaatttc
cccggtcggcggctgcatccggtgatggtcgagtcgtaa
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