Trinickia caryophylli: U0034_11490
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Entry
U0034_11490 CDS
T09722
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00280
Valine, leucine and isoleucine degradation
tcar00650
Butanoate metabolism
tcar00907
Pinene, camphor and geraniol degradation
tcar01100
Metabolic pathways
tcar01120
Microbial metabolism in diverse environments
tcar04146
Peroxisome
Module
tcar_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
U0034_11490
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
U0034_11490
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
U0034_11490
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
U0034_11490
Enzymes [BR:
tcar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
U0034_11490
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
WQE10433
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All DBs
Position
1:complement(2560781..2561704)
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AA seq
307 aa
AA seq
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MSLPRAVKIVEVGPRDGLQNEKQFVSTSVKIELVDRLSAAGFANIEAASFVSPKWVPQMA
DGAQVMAGIARRAGTIYSVLTPNLKGLEGALAAKADEVVIFGAASEAFSERNINCSIAQS
IERFEPVARAAKDNGLRLRGSVSCALGCPYQGEVSVSAVVDVVQRLADLGCDEIDIADTI
GVGTPKRTREVYTAVSKVFPRERLSGHFHDTYGQALANIYASLLEGIEIFHASVAGLGGC
PYAKGATGNVATEDVLYLMNGLGIETGVDLAQVVAIGEFISTAVGRPNVSRAGRALLAKA
KSTDEPQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcctcgcgcagtcaagatcgtcgaagtgggcccacgcgacgggctgcaaaac
gaaaagcagttcgtctccacgtcggtgaagatcgaactcgtcgatcgcctctcggctgcg
ggcttcgccaatatcgaagccgcatcgttcgtttcgccgaaatgggtgccgcagatggcg
gacggcgcgcaagtcatggccggcatcgcgcgccgtgccggcacgatctactcggtgctg
acaccgaacctcaaaggcctcgagggtgcgctcgcggccaaggccgacgaagtcgtgatt
ttcggggcggcgagcgaagcgttttccgagcgcaacatcaactgcagcatcgcgcaaagc
atcgagcggttcgagcccgtcgcacgcgccgccaaggacaacggcctgcgcctgcgcggt
agcgtgtcgtgcgcgctcggctgcccctatcagggcgaggtgtccgtatcggcggtcgtc
gacgtcgtgcagcgcctggccgatctcggctgcgacgaaatcgacatcgccgataccatc
ggcgttggcacgcccaagcgcacgcgcgaagtctatacggctgtttcgaaggtctttccg
cgcgaaaggctttcgggtcatttccatgacacttatgggcaggcgctcgcaaacatctac
gcatcgctgctcgaaggcatcgagatttttcacgcatccgtggcgggcctcggcggctgc
ccttacgcgaaaggcgccaccggcaacgtcgcgacggaggacgtgctgtatctgatgaac
gggcttggcatcgagacaggagtcgatcttgcgcaagtcgtggcgatcggcgaattcata
tcgacggcggtggggcggcccaacgtttcgcgtgcgggccgcgcgttgctcgccaaggcg
aaaagcaccgacgaaccgcagtaa
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