Trinickia caryophylli: U0034_11595
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Entry
U0034_11595 CDS
T09722
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
tcar02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_11595
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
U0034_11595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_11595
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
U0034_11595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
WQE10453
LinkDB
All DBs
Position
1:complement(2583999..2585594)
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AA seq
531 aa
AA seq
DB search
MRATRIAALIAAAACALPALSLAKPLTVCTESSPDGFDVVQYNSLVTTNASADVIFNTLV
SYDEVAKKVVPALADKWEASPDGLTYTFHLRPHVAFQKTEYFSPTRELTADDVVFTFSRM
LDAGNPWHKVTGPNGFPHAQSMGLVKLVKAVTKVDDATVKFELNEPNATFVPILTMGFAS
IYSAEYADQLLKAGRQTDLNAKPVGTGPFVLKSYTKDAVIRYDANPQYWGPKPKIDRLIY
AITPDAAVRAQKVKARECDIALSPKPADVAAAKSDKALKVVETPAFMTAFVALNTQKKPL
DNDKVRQALNLAFDRATYLKVVFDNTAQPATNPYPPNTWSYDKTIKPYPHDIEQAKKLLA
QAGYPNGFSTTIWVRPTGSVLNPNPKAGAELLQADLAKIGVKAEVKVIEWGELIKEAKQG
QHDLLFMGWSGDNGDPDNYLSPLFSCNAVKSGINFARYCDPQLDKLIAEGRATADQGKRA
SAYEAAQKIIHDEALWIPLGYPTAAAITRAGVSGYQVSPFGRQNFGAVSVQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccacacggatcgccgctctcatcgccgccgctgcctgcgccttgccagccctg
tcgctggccaagccgctcacggtttgcaccgaatcgagccccgacggcttcgacgtcgtc
cagtacaactcgctcgtgacgacgaacgcgtcggccgacgtgatcttcaatacgctcgtg
tcttacgacgaagtcgcgaaaaaagtcgttcccgcgctggccgacaagtgggaggcaagc
cccgacggcctgacctacacgttccatctgcgtccgcatgtggcgttccagaagacggag
tatttttcgccgacgcgcgaactcacggccgacgacgtcgttttcacgttctcgcgcatg
ctcgatgcgggcaatccgtggcacaaggtgacgggaccgaacgggttcccgcacgcgcag
tcgatgggcctcgtcaagctcgtgaaagcggtgacgaaagtcgacgacgcaacagtgaag
ttcgagctcaacgagcccaacgcgacattcgtaccgatcctgacgatgggcttcgcatcg
atctattcggccgagtacgccgaccagttgctcaaggccggcagacagacggacctcaat
gcgaagcccgtcggcaccgggcccttcgtcctgaagagctatacgaaagacgcggtgatc
cgctatgacgcgaacccgcagtactgggggcccaagccgaagatcgaccggctcatctac
gccatcacgcccgatgcggccgtgcgcgcgcaaaaggtcaaggcgcgcgagtgcgacatt
gcgctctcgccgaagccggccgacgtggcggcggccaagtccgacaaggcgttgaaggtc
gtcgaaacaccggcgttcatgaccgccttcgtggcattgaacacgcagaaaaagccgctc
gacaacgacaaggtgcgacaggccctgaacctggcgttcgatcgcgcgacctatctgaaa
gtcgtcttcgacaatacggcccagcccgcgacgaatccctatccgccgaatacctggagc
tacgacaagaccatcaagccgtatccccacgacatcgagcaagccaaaaagctgctcgcg
caggccggctatccgaacggtttctcgacgacgatctgggtacgcccgacgggcagcgtg
ctgaaccccaatccgaaagcgggcgcggagctgctgcaggccgatcttgcgaagatcggc
gtgaaggccgaggtgaaggtgatcgaatggggcgagctcatcaaggaggccaagcagggg
cagcatgatctgctgttcatgggctggtccggagacaacggcgaccccgataactacctc
tcgccgcttttcagctgcaatgccgtgaaatcgggcatcaatttcgcgcgctattgcgat
ccgcagctcgacaagctcattgccgagggccgcgccacggccgatcagggcaagcgcgcg
agcgcctatgaagccgcgcaaaagatcatccatgacgaagcgctctggatcccgctcggc
tatccgaccgcggcggcaatcacgcgcgccggcgtcagcggctatcaggtcagcccgttc
ggccggcagaacttcggcgccgtttccgtgcagtag
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