Trinickia caryophylli: U0034_12125
Help
Entry
U0034_12125 CDS
T09722
Name
(GenBank) tetratricopeptide repeat protein
Organism
tcar
Trinickia caryophylli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_16
TPR_2
TPR_17
TPR_8
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_9
HrpB1_HrpK
ARM_TT21_5th
ARM_TT21
ARM_TT21_C
TPR_11
TPR-S
TPR_Slam
Coatomer_E
TPR_20
TPR_MalT
TPR_21
FAT
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
WQE10547
LinkDB
All DBs
Position
1:complement(2692293..2694122)
Genome browser
AA seq
609 aa
AA seq
DB search
MILSLKQLLTRAAGVPRARHAPVGRLVGAALCVFTLAANPAWAQDPASADDASAADTFSS
SLPEETKGLPNIALTSQIVFQVLAAEIALQRNQPAPAYQTYLALARDTHDPRMAQRAAEI
AIAAQSPADALTAAQLWRQYAPGSERAAQLDASLLVLSGKPEDAAPLLAAELAKVPADER
GNSILALQVLLSRGPNRVGGLHVLQDLLKNDMDRPEAQVAIGRQQLLADDQPGARASFDR
ALKLKPDYLPAALALAQMGPDARNDAIASFESYVKQNPKSHDARLALAQLYLASERIDDA
QKQFEALRGLDSRDPTPLMALGLIKIQQKQYDAAQKYLKQYADLTERTPGADAGQAYIFL
AQLALEQKDEGQAAKWLDKVPPDSPRYVAARVTRAQLLAKNGKLDEARKMLAGLQSADPH
AGALIARTDAAILFDAKRYPEAEARLSAANDAYPDNPEILYDYAMAAEKNGHFDLMESKL
RQLIKDQPDNPQAYNALGYSLADRNQHLDEAEKLIEKASALAPNDAFIMDSLGWVKYRRG
DTNDAARVLRKAYDLQPNAEIGAHLGEVLWKSGDQVKAIAAWRDARKLEPDNETLVKTLK
RFQVNTNDL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtccctgaagcagcttttgacgcgcgcggccggcgtgccccgtgcccgccac
gcgcccgtgggccggctcgtcggcgccgccctttgcgtcttcacgctcgcggcaaacccc
gcgtgggctcaggatcccgcatcggcggacgatgcctcggccgccgataccttctcgtcg
tcgcttcccgaggagacgaaaggcctgcccaacatcgcgttgacgagccagatcgtcttc
caggttctcgcggccgaaatcgcgctgcagcgcaatcagccggcgccggcttaccagacc
tatctcgcgcttgcgcgcgatacgcacgatccacgcatggcgcagcgcgccgccgaaatc
gcgatcgcggcgcaaagcccggccgacgcgctcacggcggcccagctctggcgccagtac
gcgcccggctccgagcgcgcggcgcagctcgatgcgtcgttgctcgtgctctcgggcaaa
cccgaggacgcggcgccgcttctcgccgccgagctcgccaaggtgccggccgacgagcgg
ggcaactcgatcctcgcgctgcaagtgctgctctcgcgcgggcccaaccgggtcggcggg
ttgcacgtgttgcaggacctgctcaagaacgacatggaccggcccgaagcgcaggtcgcg
atcggccgccagcaactgctcgccgacgatcaaccgggtgcgcgcgcatcgttcgaccgg
gccctcaaactcaagcccgactacctgccggccgcgctcgcactcgcccaaatggggccc
gacgctcgcaacgacgccattgcatcgttcgagtcgtatgtgaagcaaaacccgaaatcg
cacgatgcacggctcgcgctcgcacagctttacctcgcgagcgagcgcatcgacgacgcg
caaaagcagttcgaggcgctgcgcggcctcgattcgcgcgatccgacgccgctcatggcg
ctcggtctcatcaagatccagcaaaagcagtacgacgcggcgcagaagtatctgaaacag
tatgccgatctgaccgagaggacccccggcgcggacgccggccaggcgtacatcttcctc
gcccagctcgccctggagcaaaaggacgaagggcaggctgccaagtggctcgacaaggta
ccgcccgacagccctcgctacgtcgccgcgcgcgtgacgcgggcgcagttgctcgcgaag
aacggcaagctcgacgaagcgcgcaagatgctcgccggcctgcagagcgcagacccgcac
gccggcgcgctgatcgcccgcaccgatgccgcgatcctcttcgacgcgaagcgctacccg
gaggccgaagcgcggctttccgcggccaatgacgcctatcccgacaatccggagattctc
tacgattacgcgatggcggccgaaaagaacggccatttcgatctgatggagtcgaaactg
cgccagttgatcaaggaccagcccgacaacccgcaggcctacaacgcactcggctactcg
ctggccgaccggaaccagcacctcgacgaggccgaaaaactgatcgaaaaggcatccgcg
ctcgcgccgaacgacgccttcatcatggacagcctcggctgggtcaagtaccggcgcggc
gacacgaacgacgcggcccgtgtcctgcgcaaggcatacgacctgcaaccgaacgcggag
atcggcgcgcacctgggcgaagtgctctggaaaagcggcgatcaggtcaaggcgatcgcg
gcgtggcgcgacgcacgcaagctcgagcccgataacgaaacgctcgtgaaaacgctcaag
cgcttccaggtcaacaccaacgatctctga
DBGET
integrated database retrieval system
