KEGG   Trinickia caryophylli: U0034_12170
Entry
U0034_12170       CDS       T09722                                 
Symbol
lptB
Name
(GenBank) LPS export ABC transporter ATP-binding protein
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
tcar  Trinickia caryophylli
Pathway
tcar02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    U0034_12170 (lptB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tcar02000]
    U0034_12170 (lptB)
Enzymes [BR:tcar01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     U0034_12170 (lptB)
Transporters [BR:tcar02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    U0034_12170 (lptB)
 Other transporters
  Pores ion channels [TC:1]
   U0034_12170 (lptB)
SSDB
Motif
Pfam: ABC_tran BCA_ABC_TP_C AAA_21 DO-GTPase2 AAA_23 AAA_19 SbcC_Walker_B
Other DBs
NCBI-ProteinID: WQE13707
LinkDB
Position
1:complement(2702112..2702828)
AA seq 238 aa
MRKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIVLDGSSIS
LLPIHKRAALGLSYLPQEASVFRKLSVEQNIRAVLELQTGENGKRLAKSAIDARTEALLD
ELQIAHLRENPALSLSGGERRRVEIARALATSPSFILLDEPFAGVDPIAVLEIQKIVKFL
KQRNIGVLITDHNVRETLGICDHAYIISDGTVLAAGAPSDIIENESVRRVYLGEHFRM
NT seq 717 nt   +upstreamnt  +downstreamnt
ctgcgcaaacgctacggctcgcgcaccgtcgtcaaggacgtctcgctcgacgtcaagagc
ggcgaagtggtgggcctgctgggcccgaacggcgcaggcaagacgacttcgttctacatg
atcgtaggcctcgtgccgctcgacgcgggggaaatcgtgctcgacggcagctcgatcagc
ctgctgccgatccacaagcgcgccgcgctcggcctctcgtatctgcctcaggaagcgtcc
gtcttccgcaaactgtcggtcgaacagaacatccgcgcggtgctcgagctgcaaacgggc
gaaaacggcaagcggcttgccaagtccgctatcgacgcgcgcacggaagcgctgctcgac
gagttgcaaatcgctcatctgcgtgaaaaccctgcactgtcgttgtcgggcggcgagcga
cggcgcgtcgaaattgctcgggcgctggcgacgagcccaagcttcatcctgctcgacgaa
ccgtttgcgggcgtcgatccgatcgcggtgctggaaattcagaagatcgtgaaattcctc
aagcagcgcaacatcggcgtgctcattaccgaccacaatgtccgcgagacgctcggcatc
tgcgatcacgcctacatcatcagcgacggaacggtgctcgccgccggcgccccgagcgac
atcatcgaaaacgaaagcgtccgccgcgtgtacctcggcgagcacttccgcatgtag

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