Trinickia caryophylli: U0034_12225 Help Entry U0034_12225       CDS       T09722                                  Symbol uvrA Name (GenBank) excinuclease ABC subunit UvrA   KO K03701   excinuclease ABC subunit A Organism tcar  Trinickia caryophylli Pathway tcar03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tcar00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     U0034_12225 (uvrA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tcar03400]     U0034_12225 (uvrA) DNA repair and recombination proteins [BR:tcar03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      U0034_12225 (uvrA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       U0034_12225 (uvrA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 AAA_23 nSTAND1 AAA_21 DnaJ_CXXCXGXG RsgA_GTPase nSTAND3 AAA_22 AAA_25 Viral_helicase1 cobW Motif Other DBs NCBI-ProteinID:  WQE10566 LinkDB All DBs Position 1:complement(2712191..2715052) Genome browser AA seq 953 aa AA seqDB search MEQIRIRGARTHNLKNVNLDLPRHQLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC PDHDIALEAQSVSQMVDTVLALPEDTKLMILAPVVANRKGEHAELFEQMQAQGFIRFRIR SGGGAANEGTAQICDVESLPKLKKNDKHSIDVVVDRLKVRPDVKQRLAESFETALRLADG RAVALEMDTGHEHLFSSKFACPVCSYSLSELEPRLFSFNNPMGACPDCDGLGQITFFDPK RVVAHPSISLAAGAVKGWDRRNQFYFQMLQSLAAYYDFDIDTPFEDLPEKIKKLILLGSG KETIPFSYINERGRTTVREHVFEGIIPNLERRYRETDSAAVREELAKYQNNQPCPSCDGS RLRREARFVRLGAGENARAIFEVSAWPLRDALGYFQTLILEGAKREIGEKVVKEIVARLM FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI ATLKHLRDLGNSVIVVEHDEDMIRMADYIVDMGPGAGEHGGMIIAQGTPPQVEADPASLT GRYLAGALRIQFPDERKDPEDRRLRIVEAHGNNLKRVTLDLPVGLLTCVTGVSGSGKSTL INDTLYNAVAQHLYGSSAEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP IRELFAGVPAAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKR YNRETLDIQYKGKNISEVLDMTVEQAHEFFNAVPVISRKLKTLLDVGLGYIRLGQSATTL SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDHGNTVVIIEH NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQIAKAKASFTGKYLAPLLERR NT seq 2862 nt NT seq  +upstreamnt  +downstreamnt atggaacagattcgcattcgtggggctcgcacccacaacctgaaaaacgtcaatctcgac ctgccgcgccaccagctcatcgtcatcacggggttgtcgggctccggcaaatcgtcgctc gcgttcgacacgctttacgccgaagggcagcgccgctacgtcgagagcctgtcggcctac gcgcgccagttcctgcagttgatggagaagcccgacgtcgatctgatcgaaggcctctcg cccgcgatctcgatcgagcaaaaggccacctcgcacaatccgcgctcgaccgtcggcacc gtcaccgagattcacgactacctgcgcctgctctacgcgcgcgtgggcacgccctactgc cccgatcacgacatcgcgctcgaagcgcaaagcgtctcgcagatggtcgacacggtgctc gcgctgcccgaggacacgaagctcatgatcctcgcgcccgtggtcgcgaaccgcaagggg gaacatgcggaactcttcgagcagatgcaggcccagggcttcatccgctttcggatccgc tcgggcggcggcgccgccaacgaaggcacggcgcagatctgcgatgtcgagtcgctgccc aagctcaagaagaacgacaagcattcgatcgacgtggtggtcgaccgcctgaaggtgcgc cccgacgtgaagcagcgtctggccgaatcgttcgaaaccgcgctgcgtctggccgacggc cgcgccgtcgcactcgagatggacaccgggcacgagcacctcttcagctcgaaattcgcg tgccccgtgtgctcctattcgctgtccgagctcgagccacgcctcttctcgttcaacaac ccgatgggcgcctgccccgattgcgacgggctcggccagatcacgttcttcgatccgaag cgcgtcgtcgcgcacccgtcgatctcgctcgccgccggcgccgtcaagggctgggaccgc cgcaatcagttctacttccagatgctgcaaagcctggcggcctattacgacttcgacatc gatacgccgttcgaggacctgccggagaagatcaagaagctgatcctgctcggctcgggc aaggaaacgatcccgttctcctacatcaacgagcgcggccgcaccaccgtgcgcgagcac gtgttcgaaggcatcattcccaatctcgagcgacgctatcgcgaaaccgattcggccgcg gtgcgcgaagagctcgccaaatatcagaacaatcagccctgcccctcgtgcgacggctcg cggctgcgccgcgaagcgcgtttcgtgcggctcggcgcgggcgagaacgcgcgcgcgatc ttcgaggtcagcgcatggcccctgcgcgacgcactcggctactttcagacgctgatcctc gaaggcgccaagcgcgagatcggcgagaaggtcgtgaaggaaatcgtcgcccggctcatg ttcctcaacaacgtcgggctcgactacctctcgctcgagcgcagcgcggataccctctcg ggcggcgaggcccagcgcatccggctcgcctcgcagatcggctcggggctcacgggcgtc atgtacgtgctcgacgagccctcgatcggcctgcatcagcgcgacaacgaccgcctcatc gccacgctcaagcacctgcgcgatctcggcaactccgtcatcgtcgtcgaacacgacgag gacatgatccgcatggcggactacatcgtcgacatgggccccggtgccggcgagcacggc ggcatgatcatcgcccagggcacgccgccccaggtcgaagcggatccggcgtcgctcacg ggccgctacctcgccggtgcgctgcgcatccagttccccgacgagcgcaaggatccggaa gaccggcggctgcgcattgtcgaggcgcacggcaacaatctgaagcgcgtcacgctggac ctgccggtcggcctgctcacctgcgtgacgggcgtctcgggctcgggcaagtccacgctc atcaacgacacgctctacaacgccgtggcgcagcacctttacggctcgtcggcggagccg gccccctacgagtcgatcgagggcctcgaacacttcgacaaggtcatcaacgtcgatcaa tcgccgatcggccgcacgccgcgctcgaacccggccacctatacggggctcttcacgccg atccgcgaactcttcgcgggcgtgccggcggcgaaggagcgcggctacgaccccggccgc ttctcgttcaacgtgaagggcggccgctgcgagtcctgccagggcgacggcgtgctcaaa gtcgaaatgcatttcctgcccgatgtctacgtgccttgcgacgtctgccacggaaaacgc tacaaccgcgaaacgctcgacatccaatacaagggcaagaacatcagcgaggtgctcgac atgaccgtcgagcaggcgcatgaatttttcaacgccgtacctgtcatatcccgcaagctc aagacgctgctcgatgtgggcctcggctacatccggctcggccagtcggccacgacgctt tcgggcggcgaggcccagcgcgtcaagctttcgctcgaactgtcgaaacgcgacaccggc agaacgctctatatactggacgagccgaccaccggattgcactttcatgacatcgcactg ttgctcgaagtcatccaccggttacgcgatcatggcaatacggtcgtgatcatcgagcat aatctcgatgtaatcaaaaccgccgactgggtgatcgacctcggtccggaaggcggcgcg ggcggcggccagatcatcgcgcaaggcacgcccgaacagattgcaaaggcaaaggcgagc ttcacggggaaataccttgcgccgctgctcgagcgccgctga

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