Trinickia caryophylli: U0034_12235
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Entry
U0034_12235 CDS
T09722
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar03030
DNA replication
tcar03430
Mismatch repair
tcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0034_12235
03430 Mismatch repair
U0034_12235
03440 Homologous recombination
U0034_12235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcar03032
]
U0034_12235
03400 DNA repair and recombination proteins [BR:
tcar03400
]
U0034_12235
03029 Mitochondrial biogenesis [BR:
tcar03029
]
U0034_12235
DNA replication proteins [BR:
tcar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
U0034_12235
DNA repair and recombination proteins [BR:
tcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
U0034_12235
TLS (translesion DNA synthesis) factors
Other SOS response factors
U0034_12235
Mitochondrial biogenesis [BR:
tcar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
U0034_12235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
tRNA_anti-codon
DUF3127
YorF
SSB_1
Motif
Other DBs
NCBI-ProteinID:
WQE10568
LinkDB
All DBs
Position
1:2716454..2716981
Genome browser
AA seq
175 aa
AA seq
DB search
MASVNKVILVGNLGADPEVRYLPSGDAIANIRLATTDRYKDKTSGEFKEATEWHRVVFFG
RLAEIVNEYLKKGSSVYVEGRLRTRKWQGQDGQDRYSTEIVADQMQMLGGRGGSGGGGGM
GDDGGYSRGEPMERGGGGGGRAAGGGARSGGGGGSSRPSAPAGGGLDEMDDDIPF
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgtgaacaaggtcattctcgtcggcaacctcggcgccgatcccgaagtgcgc
tacctgccgagcggagacgcaatagcgaacatccgcctcgcgacgactgaccggtacaag
gacaagacgtctggcgaattcaaggaagcgaccgaatggcaccgcgtggtgttctttggc
cggctcgccgaaatcgtcaacgagtatctgaagaaaggctcgtcggtttatgtcgaaggc
cgcctgcgcacgcgcaagtggcaggggcaggatgggcaggatcggtactccaccgagatc
gtggccgatcagatgcagatgctcggcggccgcggcggttcgggcggcggcggcggtatg
ggcgatgacggtgggtatagccgtggcgagccgatggaacgcggtggtggtggcggtggc
cgcgcggcgggcggtggcgcgcggagtggcggcggcggtggttcgagccgtccgagtgcg
ccggccggcggtgggctcgatgagatggatgacgatattccgttctaa
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