Trinickia caryophylli: U0034_12255
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Entry
U0034_12255 CDS
T09722
Name
(GenBank) TolC family protein
KO
K07796
outer membrane protein, copper/silver efflux system
Organism
tcar
Trinickia caryophylli
Pathway
tcar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0034_12255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_12255
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_12255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WQE10571
LinkDB
All DBs
Position
1:complement(2724298..2725590)
Genome browser
AA seq
430 aa
AA seq
DB search
MQLFFRTPPRRRVPPRVHMIVAALLAAGVVHAQQAPFTLDAALQSASDHSASMLAAQASV
RASSEAAVRAGQLPDPMLKAGIDNLPVNGPQRFTVGQDFMTMRRIGIAQEWVSGEKRQLR
SALASEVVRRERAGYLVQLANVRQQTATAWLEATYAKQALGLRQALLDHMRHELAVTKAS
YRGAKTSAADVVQAQAMLAQTEDQVLKAQQTYQTALIGLSRWTAVPVSDVTGEPPAPESF
VSSLPPDELRISQPTLVAAADEIAVAEADTAVASSERRPNWTWELAYQQRGGAYSNMVSV
GVTIPLPLNRKNRQDRDVAEKAELAAKARLMYEDTLRQVQAEIRAESATLASGRARIANL
SQSFLPAADQRVQLADAAYRAGTGSLADTFSTRRAQIEAQIQVLDLKREVSQTWAQLEYQ
VVPPTMAAAL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcttttttcgcacgccgccgcgtcggcgtgttcctccgcgcgtgcacatgatc
gttgccgcgctgcttgccgcgggcgtcgtgcacgcgcagcaagcgccgttcacgctcgac
gccgctttgcagtcggccagtgaccactcggcgtcgatgctggccgcgcaggcctcggta
cgggccagctcggaagcggccgtcagggccggacaactgccggacccgatgctgaaagcc
ggcatcgacaacctgccggtgaacgggccgcagcgcttcaccgtgggccaggacttcatg
acgatgcggcgcatcggcatcgcgcaggagtgggtctccggcgaaaagcggcagcttcgc
tccgcgctggcgagcgaagtcgtcaggcgcgagcgcgccggctatctggtgcagctcgcc
aatgtccgccagcagaccgcgacagcctggctcgaggccacctacgcgaagcaggcgctc
ggacttcggcaggcattgctcgatcacatgcgccacgaactggcggtaacgaaagcgtcg
taccgcggggcgaagacgagcgcggccgacgtggtgcaggcgcaagcaatgctggcgcag
acggaagaccaggttctcaaggcgcagcagacctatcagaccgcactcatcggtctgtca
cggtggacggcggtgccggtgtccgacgtaacgggcgagccgcccgcgccggaatcgttc
gtgtcgtccctgccgccggacgaattgcgtatttcgcagccgacgctcgtggccgctgcc
gacgaaatagcggttgccgaagccgatacggcggtggcgagcagcgaacggcgccccaac
tggacgtgggagctcgcctaccagcagcgcggcggtgcgtattcgaacatggtgtcggtg
ggtgtcaccatcccgctgccgttgaatcgaaagaatcgtcaggaccgtgacgtcgccgag
aaagccgaactcgcagcgaaggcccggctgatgtacgaggacacgctgcggcaggtccag
gccgaaatccgcgccgagtccgccacgctggcgagcggccgggcgcgcatcgccaacctg
agccagtcttttctgcccgctgccgaccagcgcgtgcagctcgccgatgcggcataccga
gccgggaccggctcgctcgcggacacattttccacccgacgcgcacagatcgaggcacag
atccaggtgctcgacctgaagcgcgaggtgtcccaaacctgggcgcagctcgaatatcag
gtcgtgccgcccacgatggcggcagcgctgtga
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