Trinickia caryophylli: U0034_13305
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Entry
U0034_13305 CDS
T09722
Symbol
sctE
Name
(GenBank) type III secretion system translocon subunit SctE
KO
K15345
secreted effector protein SseC
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_13305 (sctE)
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_13305 (sctE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
DUF3837
DUF5401
CelTOS
Motif
Other DBs
NCBI-ProteinID:
WQE10766
LinkDB
All DBs
Position
1:2945887..2947302
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AA seq
471 aa
AA seq
DB search
MSTISTLRFIDLAFPEPSVQPNDHEGKRAREARGLLALPEAVSAERKHGNPRRDWARPAA
SAAAVSARAAAEAIERVFGQIGKPGPRNGVSVLRGVEKEPMQSLMLAVTLMSVEALGSLA
NATGKALNIMAQGQRAVEQHEVQEIRDQIDKAIEQQKKAKKAGIFSAICDWVVSAVEVVS
GAARVVTGALTGDAMMVAGGAMDLAAGTAGLVKAACETIALIDTKDAAKFKAIAETAGKI
QLACEIVGAIVDITSAAQNMLVTKVIPKAAEKVLEEGAGRVVATAVKDGSKEALEAAAKQ
LGKEVVKSVSEEALDVLGKDVVEKIIQDAVKTAAKNALERGGDIVAEKLAKDIVKQIRRS
LIKAIVKAAVVTTVNVTRGALSGANEVFSGVIQIERARLQKQIDQLILDQEMLQALFDDF
DRAKKDTEEKMKDLIHAQGRALAGGSAEMRATATVAIRGAASMAGIAAATV
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgatatcgactttgcggttcatcgatctggcttttcccgagccgtcggtgcag
ccgaacgatcacgaaggaaagcgcgcgcgcgaagcgcgcgggttgctcgccctgcccgaa
gcggtcagcgccgagcgcaagcacgggaatcccaggcgcgactgggccaggccggcagcc
tcggccgcggcagtgtcggcgcgcgccgccgccgaggcgatcgagcgggtattcgggcag
atcggcaagccgggccctcgcaacggcgtatcggtgctgcgaggcgtggagaaggagccg
atgcaatcgctgatgctcgcggtgacgctcatgtcggtcgaggcgctgggcagcctcgcc
aatgcgacgggcaaggccctgaacatcatggcgcagggccagcgggccgtcgagcagcac
gaagtgcaggagatccgcgaccagatcgacaaggccatcgagcagcagaagaaggccaag
aaggccggcattttcagcgcgatctgcgactgggtggtctcggcggtggaggtggtgtcg
ggcgcggcgcgcgtcgtgacgggcgcgctgaccggcgacgcgatgatggtcgcgggcggg
gccatggacctcgccgcgggcacggcggggctggtcaaggctgcgtgcgagacgatcgcg
ctcatcgatacgaaggatgccgccaagttcaaggccattgccgagacggcggggaagatt
cagctggcctgcgagatcgtgggggccatcgtcgacattacgagcgcagcgcagaacatg
ctcgtcaccaaggtcattccgaaagcggcggagaaagtgctggaagagggcgccgggcga
gtcgtggcaaccgccgtgaaggacggctcgaaggaagcgctcgaggcggcggcgaagcag
cttggcaaggaggtcgtcaagtccgtctcggaggaggcgctggacgtgctcggcaaggac
gtcgtcgaaaagatcattcaggacgccgtgaagaccgccgccaagaacgcgctcgagcgc
ggcggagatatcgtggcggagaagcttgcgaaggacatcgtcaagcagattcgccgcagc
ctcatcaaggcgatcgtgaaagcggcagtcgtcaccaccgtcaacgtgacgcgcggcgcg
ctgagcggtgcgaacgaagttttctcgggcgtcattcagatcgagcgggccaggctgcaa
aagcagatcgatcaactgatcctcgaccaggaaatgctccaggcgctcttcgacgatttc
gatcgggcgaagaaggacaccgaggaaaagatgaaggacttgatccatgcgcagggacgc
gcgctcgcgggcgggtcggccgaaatgcgggcaaccgcgaccgtcgcgatccgaggggcc
gcgtcgatggccggcattgccgcagccaccgtttga
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