Trinickia caryophylli: U0034_13380
Help
Entry
U0034_13380 CDS
T09722
Name
(GenBank) DegQ family serine endoprotease
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar01503
Cationic antimicrobial peptide (CAMP) resistance
tcar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0034_13380
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
U0034_13380
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcar01002
]
U0034_13380
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tcar03110
]
U0034_13380
Enzymes [BR:
tcar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
U0034_13380
Peptidases and inhibitors [BR:
tcar01002
]
Serine peptidases
Family S1: chymotrypsin family
U0034_13380
Chaperones and folding catalysts [BR:
tcar03110
]
Other chaperones and cochaperones
DegP / HtrA
U0034_13380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_6
PDZ_2
PDZ
Trypsin
PDZ_Tricorn
Pept_S41_N_bact
GRASP55_65
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
WQE10781
LinkDB
All DBs
Position
1:2963332..2964816
Genome browser
AA seq
494 aa
AA seq
DB search
MNTKALSRGAVAIAVAVALSAGYVAGTRHADPQIIASAQAAPMMPAEAAAKTGIPDFSGL
VETYGPAVVNISAKHVVKRQTRRSTQQLPIDPSDPFYQFFKRFYGQFPGFGDDTPQQDDV
PSASLGSGFIISSDGYILTNAHVVDGANVVTVKLTDKREFRAKVVGTDKQSDVAVLKIDA
SNLPIVKIGDPKQSKVGQWVVAIGSPYGFENTVTSGIISAKGRSLPEENYTPFIQTDVPV
NPGNSGGPLFNLQGQVIGINSMIYSQTGGFQGLSFAIPIDEAMRVKDELVKTGHVSRGRL
GVAVQGVNQTLANSFGLQKPMGALVSSVDPGGPAAKAGLQAGDVILAVNGVAVDDSTDLP
AQIAAMKPGTKATLDIWRDKSKRQLAVTLGSLSDTKVADNGTKSIEPTRLGVSVRALTPQ
EKSSASLSHGLLVQQSSGPAASAGIQPGDVILAVNGNPVTSPAQLSQIISKAGSSVALLI
QRDNAQIFVPVDLG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaaggctttgtctcgcggggcggtcgcgatcgcggtcgccgtcgcattgtcc
gcaggctatgtggccggcacgcgccacgccgatcctcagatcattgcatcggcgcaggcg
gcgccgatgatgccggccgaggcggcggccaagacgggcattcccgatttctcggggctc
gtcgaaacgtacggtccggcggtcgtcaacatcagcgcgaagcatgtcgtgaagcgccag
acgcggcgctcgacacagcagttgccgatcgatccgagcgatccgttctaccagttcttc
aagcgcttttacggccagttccccggcttcggcgacgacacgccacagcaggacgacgtg
ccgagcgctagcctcggctcgggcttcatcatcagcagcgacggctacatcctgacgaac
gcgcatgtcgtggacggcgccaatgtcgtgacggtcaagctcaccgacaagcgcgaattc
cgcgccaaggtcgtgggtaccgacaagcagtcggacgtcgccgtgctgaagatcgacgca
tcgaacctgccgatcgtcaagatcggcgatccgaagcaaagcaaggtcggccagtgggtg
gtcgcgatcggttcgccgtacggtttcgagaacacggtgacctcgggcatcatcagcgcg
aaggggcgttcgctgcctgaagagaactacaccccgttcatccagaccgatgtaccggtg
aacccgggcaactcgggtggcccgctcttcaacctgcaaggtcaggtgatcggcatcaac
tcgatgatctactcgcaaacgggcggcttccagggcctgtcgtttgcgattccgatcgac
gaggcgatgcgcgtgaaagacgagctcgtaaagacggggcatgtgagccgcggccggctc
ggcgtggccgtgcagggcgtcaatcagacgctcgcgaactcgttcggtctgcaaaagccg
atgggcgcgctcgtgagttcggtcgatccgggcgggccggccgcgaaggccgggctgcag
gccggtgacgtaattctggccgtgaacggcgtggcagtcgacgattcgacggatctgccc
gcgcagatcgcggccatgaagccggggacgaaggccacgctcgacatctggcgcgacaag
tcgaaaaggcagctcgcggtgacgctcggctcgctctcggacacgaaggtggccgacaac
gggaccaagagcatcgagccgacgcgcctcggcgtcagcgtgcgagccttgacgccgcag
gaaaagagcagcgcctcgctctcgcacggtctgctcgtgcagcagtcgtcggggcccgcc
gccagcgccggcattcagcccggcgacgtgattctcgccgtgaacggcaacccggtgaca
tcgccggcgcaactgagccagatcatttcgaaggcgggttccagcgtcgcgctgctgatt
caacgcgacaacgcccagatcttcgtgccggtcgatctgggttga
DBGET
integrated database retrieval system
