Trinickia caryophylli: U0034_13400
Help
Entry
U0034_13400 CDS
T09722
Name
(GenBank) TetR family transcriptional regulator
KO
K03577
TetR/AcrR family transcriptional regulator, acrAB operon repressor
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_13400
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
U0034_13400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_2
TetR_N
TetR_C_13
TetR_C_6
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
WQE10785
LinkDB
All DBs
Position
1:complement(2966889..2967563)
Genome browser
AA seq
224 aa
AA seq
DB search
MARRTKEEARETRNRILDAAEQVFHDKGVSRTSLADIAAAAGVTRGAIYWHFANKGELFT
AMFDRVLLPLDELAEERGQPVDPLRGLADKLKWCLRAVTTDPRRRRVFDILFLKCEFVDE
MGPVKARHQTSMEEGIGKIGTDLRLAIEVGQLPADLDTQRAALFVHAFIGGCLRDALMMP
PSIDYAAQADAFVEACIETLRTATALRGGKRGEHGLQAPAEPAH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgaacgaaggaagaagcgcgcgagacgcgcaaccgcatcctcgatgcggcg
gagcaggttttccacgacaagggggtgtcgcgcacgtcgctggccgacatcgccgcggcg
gcgggcgtcacgcgcggcgccatctactggcacttcgcaaacaaaggggaactgttcacg
gccatgttcgaccgggtgttgctgccgctcgatgaactcgccgaggaacgcgggcagccc
gtggacccgctgcgcgggctggcggacaagctcaaatggtgcctgcgcgccgtgacgacc
gatccacggcggcggcgggtgttcgacatcctttttctcaaatgcgagttcgtcgacgaa
atggggcccgtcaaggcgcgccatcagacgagcatggaagagggtatcggcaagatcggc
acggacttgcggctcgccatcgaggtcggccagttgccggccgatctcgatactcagcgc
gcggcgctcttcgtgcatgcgttcatcggcggctgcctgcgcgacgcgctgatgatgccg
ccgtcgatcgactatgcggcccaggccgacgcgttcgtcgaggcctgcatcgaaacgctg
cgaacggcaaccgcccttcgcggcggcaagcgcggcgagcacggcctgcaagcgcccgcg
gagcccgcgcattga
DBGET
integrated database retrieval system
