KEGG   Trinickia caryophylli: U0034_13530
Entry
U0034_13530       CDS       T09722                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
tcar  Trinickia caryophylli
Pathway
tcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U0034_13530
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_13530
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_13530
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: WQE10806
LinkDB
Position
1:2996612..2998729
AA seq 705 aa
MIFASNENGSGGSPVNAGALNGIGSVAGIASQIGSLAGLPGAGLIGGAARAVQLAQTGLS
LLGKTPESVADAINSVSASGAAQLTQSNRYVTLESPLGQDVLLVNAAIVDEYVSQLSEIH
LDLLSHQSDIDPESLVGQRVKLGLHPERAGLSEAMIVARPDTNTRYFDGYVASFARVGSS
GKVTRYEMSVVPWFWFLTRSTDCRIFQNQTAQQVLSTIFVELGFRDYQFDVRMPRKPIEY
VVMYQESYYNFCARLMEQEGLFWTFRYEKDKHVLVVGDTNATFVEMPNQRSIAYHADSAA
SEHNGIARWDEAFEFRVGKIAFRDFNYNRPSSTLMYVEAPTSRLKNKNIGTTERYEYHSL
YDTHDDGKRYARYAMEAEEALARRFNGSGYASAMTTIGRFTLENHPNAAYDGKPYIVLHV
RHEAVNDYTRHGAETPYRNTFTCLPEEVPYRSPRRTPKPHMQGTQAAIVVGPKGEEIYTD
GSRVKLHFLWDRRGKYDGTDSMWIRVSQPWAGSGWGGSAIPRIGQEVIVAYNDGDPDNPV
VVGRVFNGGAANPYHGTSGQTMGIRSQTHKGQGFNELRFSDVAGAEEMFLHAQHDMNTVV
QNAQTTQVLKGDRSIAVAKGHHFTKVSTGNLHDAVTQGNTTQQTPAGVHTIEAKELWIKV
GGEGGTSIHMTGDSIEIRKGASVILIEEADIKVQASNTHINPDNS
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgatctttgcatcgaatgagaatggcagcggcggcagccccgtcaatgccggcgcgcta
aatggcatcggctcggtggccggtatcgccagccagatcggctcgctcgccggtttgccg
ggtgcggggctgatcggcggcgcggcacgcgcggttcaactcgctcagacaggtttgtct
ttattgggcaaaacgccggaatcggtagccgatgcgatcaatagcgtatcggcaagcggc
gcggcacagctgacgcaaagcaatcgctatgtcacgctcgaatcgccattggggcaggac
gttttgctcgtgaatgcggcgatcgtcgacgaatacgtcagccaactgagtgaaatccat
ctggatctgctttctcaccaaagcgacatcgatccggaaagtctcgtggggcagcgcgtg
aagctcggcctgcatcccgagcgggcgggcttgagcgaggcgatgattgtggcgcggccc
gacacgaacacgcgctacttcgacggctatgtggcctcgtttgcgcgcgtgggcagctcg
ggcaaggtgacgcgctacgaaatgagcgtggtgccgtggttctggtttctcacgcgctcc
acggattgccggatcttccagaatcagacggcgcagcaggtcttgtcgacgatattcgtc
gagctgggctttcgcgattaccagttcgacgtacgcatgccgcgcaagccgatcgagtac
gtcgtgatgtaccaggagtcctactacaacttctgcgcgcggctgatggagcaggagggc
cttttctggacgttccgctacgagaaggacaagcacgtgctcgtggtgggcgacacgaac
gcgacgttcgtcgagatgccgaaccagaggagcattgcgtaccacgcggacagcgcggcg
agcgagcacaacggcattgcgcgctgggacgaggcgttcgaatttcgcgtcggcaagatc
gcgttccgcgacttcaactacaaccggccttcgtccacgttgatgtacgtggaagcgccc
acgagccggctcaagaacaagaacatcggcacgacggagcgctacgaataccactcgctg
tacgacacgcacgacgacggcaagcgctatgcgcgctacgcgatggaagccgaggaggcc
ctggcgcggcgcttcaacggcagcggttatgcgagcgcgatgacgacgatcgggcgcttc
acgctcgagaaccatccgaacgcggcgtacgacggcaagccctacatcgtgctgcacgtt
cgccacgaggccgtaaacgactacacgcggcacggtgccgaaacgccctatcggaacacg
ttcacgtgcttgccggaggaggtgccgtatcgatcgccgcgacgcacgccgaagccgcat
atgcagggcacgcaggccgcgatcgtggtcgggcctaaaggcgaggagatttacaccgac
ggtagccgcgtgaagctgcattttctgtgggaccgacgcggcaagtatgacggcaccgat
tcgatgtggatccgcgtgtcgcagccgtgggccggcagcggctggggcggctcggcgatt
ccgcgcatcgggcaggaggtcatcgttgcctacaacgatggagaccccgacaacccggtc
gtcgtgggccgcgtattcaatggcggtgcggcgaacccgtatcacggcacgagcgggcag
acgatgggtatccgcagccagacgcacaaggggcagggcttcaacgagctgcggttctcg
gatgtggcgggcgccgaggaaatgttcctgcatgcgcagcacgacatgaataccgtcgtg
cagaacgcgcagacgacgcaggtgctgaagggcgaccgctcgatcgcggtggccaagggg
catcacttcacgaaggtgtcgaccggcaatctgcatgatgcggtgacgcagggcaatacg
actcagcagacgcccgcaggcgttcacacgatcgaagcgaaagagttgtggatcaaggtg
ggcggggaaggcgggacgtcgattcatatgaccggcgactcgatagaaatacgcaagggc
gcctctgtcatcctcatcgaggaggccgacatcaaggtgcaggcgagcaatacgcacatc
aatcccgacaacagctga

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