Trinickia caryophylli: U0034_14050
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Entry
U0034_14050 CDS
T09722
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01998
branched-chain amino acid transport system permease protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
tcar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_14050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_14050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_14050
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
U0034_14050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
WQE10896
LinkDB
All DBs
Position
1:3106070..3107239
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AA seq
389 aa
AA seq
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MTSIQPIEPSTTLIPEKNATKTLVVGVLTAAFVILAPFVVGSAGGNYWVRVLDFAMLYVM
LALGLNVVVGFAGLLDLGYIAFYAVGSYTAALLTSPHLANQFEWIGQMFPGGIHAPYWIV
VPVAMALAALFGVLLGAPTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPINITNGPQGITG
VDPVHVGGFNLSQTHTLFGLQLPSVYMYYYLFVLCSLLVIWVCTRLQHSRIGRAWAAIRE
DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGGFQGFVSPESFTFWESVVVLACVVL
GGMGHIPGVILGAVLLAVFPEFLRSTMGPLQHWIFGHQILDTEVIRQLLYGLAMVVIMLY
RSEGLWPAPKHEDRIAKLAKRGSKKPVRA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaattcaaccgatcgagccgtccacgacgctcattcccgagaagaacgccacc
aagacgctcgttgtaggcgtgctgacggccgccttcgtgatcctggcgccattcgtcgtc
ggctcggccggcggcaactattgggtgcgcgtgctcgacttcgcgatgctctacgtcatg
ctcgcgctcggtctgaacgtcgtggtcggcttcgccggattgctcgacctgggctacatc
gcgttttatgcggtgggctcctacacggccgcgttgctgacctcgccccacctcgccaat
cagttcgagtggatcggacagatgttccccggcggcatccacgcgccgtactggatcgtc
gtgcctgtggcgatggccttggccgcactcttcggtgtgctgctcggcgccccgacgctg
cgcctgcgcggcgactacctcgcgatcgtgacgctcggcttcggtgagatcgtgcgcatt
ttcatgaacaacctcgatcgtccgatcaacatcacgaacggaccgcagggcatcacgggc
gtggacccggtgcacgtgggcggcttcaacctctcgcagacgcacacgctgttcggcctg
cagttgccatcggtgtacatgtattactacctgttcgtgctttgttcgctgctcgtgatc
tgggtctgtacgcgcctgcagcattcgcgcatcggccgcgcgtgggccgcgatccgcgaa
gacgaaatcgcggcgaaggccatgggcatcaacacccgcaacgtcaaactgctcgccttc
gcgatgggtgcgtcgttcggtggcttgtcgggcgcgatgttcggcggcttccagggtttc
gtgtcgcccgagtcgttcacgttctgggagtcggtggtcgtactcgcgtgcgtcgtgctc
ggcggcatgggccatattcccggtgtgattctcggcgcggtgctgctcgccgtgttcccc
gagttcctgcgttcgacgatgggccccctgcaacactggatcttcggtcatcagatcctc
gatacggaagtgatccgccagctgctgtacggtctggccatggtggtcatcatgctctat
cgctcggaaggcctgtggcctgcgccgaagcacgaagaccggatcgccaaattggccaag
cgcggctcgaaaaagccggtacgcgcctga
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