Trinickia caryophylli: U0034_14155
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Entry
U0034_14155 CDS
T09722
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_14155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_14155
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U0034_14155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
TOBE
SMC_N
RsgA_GTPase
AAA_29
AAA_25
nSTAND_NTPase5
AAA_23
Rad17
nSTAND1
Gln-synt_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WQE10916
LinkDB
All DBs
Position
1:3127742..3128824
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AA seq
360 aa
AA seq
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MKHTFDRLRLNSVCRSFANAEGANVAALQGLDLNIERGEFIALLGPSGCGKSTALNCIAG
LQPLTGGEIWLDDKRIDVLPPEKRGFGMVFQNYALFPHMSVLDNVGFGLKMRGTPKAETE
RRARAALQLVQLVGHEHKLPGQLSGGQQQRVAIARAIVIEPPVVLMDEPLSNLDTKLRIE
MRAEIRRIHGELERATIYVTHDQDEALSMADRIVVMKEGVVQQVASPKEVYGRPRNLHVA
RFMGYRNVVACTLEGTAGEGVSVQAGGVKFVASAMEEFDSKSAMLAIRPEDLVRAQPGSP
NAFEVDVDVVEYGGRDSLLFVKAPFGQLWARVEGEFAEGERVTLAVASDRALVYRPELAS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatactttcgatcggttgcgtctcaactcggtgtgtcgcagcttcgccaacgcg
gaaggcgcgaacgtcgcagcacttcaagggctcgatctgaatatcgaacgcggcgagttc
atcgcgctgctcgggccgtcaggatgcggcaagtcgacggcgctcaattgcatcgccggc
ctgcagccgctcacaggcggtgagatctggctggacgacaaacgtatcgacgtgctgccg
cccgaaaagcgcggcttcggcatggtctttcagaattacgcgctctttccgcacatgagc
gtgctcgacaacgtgggcttcggcctcaagatgcgcggcacgccgaaggcggaaaccgag
cgccgcgcgcgtgccgcgctgcagctcgtgcaacttgtcggacacgagcacaagctgccg
ggccagctctccggtggccagcagcagcgtgttgccattgcgcgcgcgatcgtgatcgag
ccgcccgtcgtgttgatggacgagccgctctccaacctcgatacgaagctgcgcatcgaa
atgcgcgccgaaattcgccgcatccatggcgagctcgaacgcgcgacgatctacgtgacg
cacgatcaggacgaagccctttcgatggccgaccgcatcgtcgtcatgaaagaaggcgtg
gtgcagcaagtcgcctccccgaaggaagtctacggccgcccgcgcaatctgcacgtcgcg
cggttcatgggataccgcaacgtggtggcctgcacgctcgagggcacggcgggcgagggc
gtgtcggtgcaggcgggcggcgtgaaattcgtcgcctcggcgatggaagagttcgactcg
aagtcggccatgctcgccatccgccccgaagacctcgtgcgcgcgcaaccgggttcgccc
aatgcgttcgaggtcgatgtcgacgttgtcgaatacggcggccgcgattcgctgcttttc
gtgaaggcaccgtttggccagctctgggcgcgcgtggaaggcgagttcgccgaaggcgag
cgcgtcacgctggctgtcgcgagcgatcgcgcgctcgtctaccggccggagctcgcatca
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